Evidence map›Paper›PMID 19786597›Full record

ArticleAntimicrobial agents and chemotherapy2009

Fmt bypass in Pseudomonas aeruginosa causes induction of MexXY efflux pump expression.

Ruth E Caughlan, Shubha Sriram, Denis M Daigle, Angela L Woods, Jennifer Buco, Ron L Peterson, Joann Dzink-Fox, Susan Walker, Charles R Dean

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 44 citations in OpenAlex.

  1. Impact of azithromycin on the clinical and antimicrobial effectiveness of tobramycin in the treatment of cystic fibrosis.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2017
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  4. Regulation, structure, and activity of theAntimicrobial agents and chemotherapy · 2025
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  5. Review
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  9. New Sequence Type ST3449 in Multidrug-ResistantAntibiotics (Basel, Switzerland) · 2021
    Article
  10. Article
  11. Article
  12. Defects in Efflux (Antimicrobial agents and chemotherapy · 2019
    Article
  13. Article
  14. Mutations in GeneAntimicrobial agents and chemotherapy · 2018
    Article
  15. Article
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  17. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Ruth E CaughlanInfectious Diseases, Novartis Institutes for BioMedical Research, Cambridge, MA 02139, USA.
Shubha Sriram
Denis M Daigle
Angela L Woods
Jennifer Buco
Ron L Peterson
Joann Dzink-Fox
Susan Walker
Charles R Dean
Office of Infectious Diseases · USGenomics Institute of the Novartis Research Foundation · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The intrinsic resistance of P. aeruginosa PAO1 to the peptide deformylase inhibitor (PDF-I) LBM415 was mediated by the MexAB-OprM and MexXY-OprM efflux pumps, the latter of which was strongly induced by LBM415. Single-step exposure of PAO1 deleted for mexAB-oprM (therefore lacking both MexAB-OprM and MexXY-OprM functions) to PDF-Is selected for nfxB mutants, which express the MexCD-OprJ efflux pump, indicating that these compounds are also substrates for this pump. Selection of resistant mutants by use of levels of LBM415 greater than that accommodated by efflux yielded two additional groups of mutations, in the methionyl-tRNA(fmet) formyltransferase (fmt) and folD genes. Both mechanisms are known to impose an in vitro growth deficit (also observed here), presumably due to impairment of protein synthesis. We surmised that this inherent impairment of protein synthesis would upregulate expression of mexXY in a fashion similar to upregulation by LBM415 or by ribosome inhibitory compounds. Transcriptional profiling and/or mexX::lux promoter fusion analysis revealed that fmt and folD mutants were strongly upregulated for mexXY and another gene known to be required for upregulation of the pump, PA5471. Complementation of the fmt mutation in trans reversed this constitutive expression. This supports the notion that MexXY has a natural physiological function responding to impairment of ribosome function or protein synthesis and that fmt mutation (Fmt bypass) and folD mutation generate the intracellular mexXY-inducing signal.

Indexed as

Anti-Bacterial AgentsBacterial Outer Membrane ProteinsBacterial ProteinsDrug Resistance, BacterialGene Expression Regulation, BacterialGenetic Complementation TestMembrane Transport ProteinsMicrobial Sensitivity TestsMutagenesisPeptidesPseudomonas aeruginosaTetracyclineTrimethoprimAnti-Bacterial AgentsBacterial Outer Membrane ProteinsBacterial ProteinsMembrane Transport ProteinsMexA protein, Pseudomonas aeruginosaMexB protein, Pseudomonas aeruginosaMexXY protein, Pseudomonas aeruginosaMexZ protein, Pseudomonas aeruginosaNVP PDF 713OprM protein, Pseudomonas aeruginosaPeptidesTetracyclineTrimethoprim

Identifiers

PMID19786597
PMCPMC2786328
OpenAlexW2151971375

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.