Evidence map›Paper›PMID 19786025›Full record

ArticleFEBS letters2009

A regulatory domain spanning the repeat sequence RE1 from herpes simplex virus type 1 has cell specific differential functions in trigeminal neurons and fibroblasts.

Hannah C Stevens, Carolyn Fiskerstrand, Vivien J Bubb, Robert Dalziel, John P Quinn

Open access · hybridAbstract read
In one paragraph

Article in FEBS letters, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Hannah C StevensSchool of Biomedical Sciences, Division of Physiology, University of Liverpool, L69 3BX, UK.
Carolyn Fiskerstrand
Vivien J Bubb
Robert Dalziel
John P Quinn
University of Liverpool · GBRoslin Institute · GBUniversity of Edinburgh · GB

Funding

Biotechnology and Biological Sciences Research Council BB/D016754/9Medical Research Council G0701003Wellcome TrustWellcome Trust 078428/Z/05/2
6 · The paper itself

Abstract

In this report we demonstrate that the herpes simplex virus type 1 reiteration element 1 (RE1) (nt: 117158-117353) in concert with its flanking sequences is both a cell specific and stimulus inducible regulatory domain. This region of the virus genome and specifically the RE1 supports differential reporter gene expression in both baby hamster kidney cells and disassociated rat trigeminal ganglia and is present within a region that is implicated in regulating latency of the virus in neuronal cells. Further we demonstrate that this locus is a transcriptional regulatory domain and a target for the transcription factor CCCTC binding protein.

Indexed as

AnimalsBase SequenceCCCTC-Binding FactorCells, CulturedCricetinaeCricetulusFibroblastsGenes, ReporterGenome, ViralHerpesvirus 1, HumanMolecular Sequence DataNeuronsRatsRats, WistarRegulatory Sequences, Nucleic AcidRepetitive Sequences, Nucleic AcidCCCTC-Binding FactorCTCF protein, humanRepressor Proteins

Identifiers

PMID19786025
PMCPMC2789235
OpenAlexW2156431376

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.