Evidence map›Paper›PMID 19783760›Full record

ArticleThe Plant cell2009

Phage-type RNA polymerase RPOTmp performs gene-specific transcription in mitochondria of Arabidopsis thaliana.

Kristina Kühn, Uwe Richter, Etienne H Meyer, Etienne Delannoy, Andéol Falcon de Longevialle, Nicholas O'Toole, Thomas Börner, A Harvey Millar, Ian D Small, James Whelan

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 151 citations in OpenAlex.

  1. Article
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  6. Review
  7. Article
  8. Phytohormones as Regulators of Mitochondrial Gene Expression inInternational journal of molecular sciences · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Plastid Gene Transcription: An Update on Promoters and RNA Polymerases.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  18. Article
  19. Retrograde signals from mitochondria reprogramme skoto-morphogenesis inPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Article
  20. Joint inhibition of mitochondrial complex IV and alternative oxidase by genetic or chemical means represses chloroplast transcription inPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Kristina KühnAustralian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, WA, Australia. kristina@cyllene.uwa.edu.au
Uwe Richter
Etienne H Meyer
Etienne Delannoy
Andéol Falcon de Longevialle
Nicholas O'Toole
Thomas Börner
A Harvey Millar
Ian D Small
James Whelan
University of Western Australia · AUARC Centre of Excellence in Plant Energy Biology · AUAustralian Research Council · AUHumboldt-Universität zu Berlin · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription of mitochondrial genes in animals, fungi, and plants relies on the activity of T3/T7 phage-type RNA polymerases. Two such enzymes, RPOTm and RPOTmp, are present in the mitochondria of eudicotyledonous plants; RPOTmp is additionally found in plastids. We have characterized the transcriptional role of the dual-targeted RNA polymerase in mitochondria of Arabidopsis thaliana. Examination of mitochondrial transcripts in rpoTmp mutants revealed major differences in transcript abundances between wild-type and rpoTmp plants. Decreased levels of specific transcripts were correlated with reduced abundances of the respiratory chain complexes I and IV. Altered transcript levels in rpoTmp were found to result from gene-specific transcriptional changes, establishing that RPOTmp functions in distinct transcriptional processes within mitochondria. Decreased transcription of specific genes in rpoTmp was not associated with changes in promoter utilization; therefore, RPOTmp function is not promoter specific but gene specific. This implies that additional gene-specific elements direct the transcription of a subset of mitochondrial genes by RPOTmp.

Indexed as

Transcription, GeneticArabidopsisArabidopsis ProteinsDNA, BacterialDNA-Directed RNA PolymerasesGene Expression Regulation, PlantGenes, MitochondrialMitochondriaMitochondrial ProteinsMutagenesis, InsertionalPromoter Regions, GeneticRNA, PlantArabidopsis ProteinsDNA, BacterialDNA-Directed RNA PolymerasesMitochondrial ProteinsRNA, PlantRpoTmp protein, ArabidopsisT-DNA

Identifiers

PMID19783760
PMCPMC2768943
OpenAlexW2162547778

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.