Evidence map›Paper›PMID 19783436›Full record

ArticleBioorganic & medicinal chemistry letters2009

Cellular localization and allele-selective inhibition of mutant huntingtin protein by peptide nucleic acid oligomers containing the fluorescent nucleobase [bis-o-(aminoethoxy)phenyl]pyrrolocytosine.

Jiaxin Hu, David W Dodd, Robert H E Hudson, David R Corey

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry letters, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Fluorogenic PNA probes.Beilstein journal of organic chemistry · 2018
    Review
  4. Gene suppression approaches to neurodegeneration.Alzheimer's research & therapy · 2017
    Review
  5. Review
  6. Article
  7. Review
  8. Antisense therapy in neurology.Journal of personalized medicine · 2013
    Review
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jiaxin HuDepartment of Pharmacology, UT Southwestern Medical Center at Dallas, Dallas, 6001 Forest Park Road, TX 75390, USA.
David W Dodd
Robert H E Hudson
David R Corey

Funding

Recognition of Chromosomal DNA by Peptide Nucleic AcidsR01GM073042 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI COREY, DAVID R · 2005 to 2016
$3.5M
NIGMS NIH HHS R01 GM073042PHS HHS 73042
6 · The paper itself

Abstract

Peptide nucleic acid (PNA) is a successful DNA/RNA mimic. A major challenge for research is to invent chemically modified PNAs that retain the favorable properties of the parent compound while improving biological recognition. Here, we test modified PNAs containing [bis-o-(aminoethoxy)phenyl]pyrrolocytosine bases designed to engage guanine with an additional hydrogen bond. We observe elevated melting temperatures, localization to cellular compartments, and allele-selective inhibition of mutant huntingtin protein expression.

Indexed as

AllelesCell LineCytosineFluorescent DyesHumansHuntingtin ProteinHydrogen BondingMutant ProteinsNerve Tissue ProteinsNuclear ProteinsPeptide Nucleic AcidsPyrrolesRNA, MessengerTransition Temperature(bis-o-(aminoethoxy)phenyl)pyrrolocytosineCytosineFluorescent DyesHTT protein, humanHuntingtin ProteinMutant ProteinsNerve Tissue ProteinsNuclear ProteinsPeptide Nucleic AcidsPyrrolesRNA, Messenger

Identifiers

PMID19783436
PMCPMC2770837

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.