Evidence map›Paper›PMID 19773397›Full record

ArticleThe Journal of clinical endocrinology and metabolism2009

TSPY1 copy number variation influences spermatogenesis and shows differences among Y lineages.

Claudia Giachini, Francesca Nuti, Daniel J Turner, Ilaria Laface, Yali Xue, Fabrice Daguin, Gianni Forti, Chris Tyler-Smith, Csilla Krausz

Abstract read
In one paragraph

Article in The Journal of clinical endocrinology and metabolism, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Review
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  5. Novel Mutations of TSPY1 Gene Associate Spermatogenic Failure Among Men.Reproductive sciences (Thousand Oaks, Calif.) · 2022
    Article
  6. Repetitive DNA Sequences in the Human Y Chromosome and Male Infertility.Frontiers in cell and developmental biology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Claudia GiachiniAndrology Unit, Department of Clinical Physiopathology, University of Florence, Florence 50139, Italy.
Francesca Nuti
Daniel J Turner
Ilaria Laface
Yali Xue
Fabrice Daguin
Gianni Forti
Chris Tyler-Smith
Csilla Krausz

Funding

Telethon GGP08204Wellcome Trust 077009
6 · The paper itself

Abstract

contextTSPY1 is a tandemly-repeated gene on the human Y chromosome forming an array of approximately 21-35 copies. The testicular expression pattern and the inferred function of the TSPY1 protein suggest possible involvement in spermatogenesis. However, data are scarce on TSPY1 copy number variation in different Y lineages and its role in spermatogenesis.

objectivesWe sought to define: 1) the extent of TSPY1 copy number variation within and among Y chromosome haplogroups; and 2) the role of TSPY1 dosage in spermatogenic efficiency. MATERIALS AND

methodsA total of 154 idiopathic infertile men and 130 normozoospermic controls from Central Italy were analyzed. We used a quantitative PCR assay to measure TSPY1 copy number and also defined Y haplogroups in all subjects.

resultsWe provide evidence that TSPY1 copy number shows substantial variation among Y haplogroups and thus that population stratification does represent a potential bias in case-control association studies. We also found: 1) a significant positive correlation between TSPY1 copy number and sperm count (P < 0.001); 2) a significant difference in mean TSPY1 copy number between patients and controls (28.4 +/- 8.3 vs. 33.9 +/- 10.7; P < 0.001); and 3) a 1.5-fold increased risk of abnormal sperm parameters in men with less than 33 copies (P < 0.001).

conclusionsTSPY copy number variation significantly influences spermatogenic efficiency. Low TSPY1 copy number is a new risk factor for male infertility with potential clinical consequences.

Indexed as

Chromosomes, Human, YAdultCase-Control StudiesCell Cycle ProteinsHumansInfertility, MaleItalyMaleMiddle AgedPolymerase Chain ReactionRisk FactorsSpermatogenesisCell Cycle ProteinsTSPY1 protein, human

Identifiers

PMID19773397
PMCPMC3330747

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.