Evidence map›Paper›PMID 19768537›Full record

ArticleGlycoconjugate journal2010

Transcriptional regulation of the human ST6GAL2 gene in cerebral cortex and neuronal cells.

Sylvain Lehoux, Sophie Groux-Degroote, Aurélie Cazet, Claire-Marie Dhaenens, Claude-Alain Maurage, Marie-Laure Caillet-Boudin, Philippe Delannoy, Marie-Ange Krzewinski-Recchi

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In one paragraph

Article in Glycoconjugate journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 42 citations in OpenAlex.

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  18. Analyses of N-linked glycans of PrPThe FEBS journal · 2017
    Article
  19. Review
  20. B-cell-independent sialylation of IgG.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Sylvain LehouxStructural and Functional Glycobiology Unit, UMR CNRS 8576, University of Sciences and Technologies of Lille, 59655, Villeneuve d'Ascq, France.
Sophie Groux-Degroote
Aurélie Cazet
Claire-Marie Dhaenens
Claude-Alain Maurage
Marie-Laure Caillet-Boudin
Philippe Delannoy
Marie-Ange Krzewinski-Recchi
Centre National de la Recherche Scientifique · FRInserm · FRUnité de Glycobiologie Structurale et Fonctionnelle · FRUniversité de Lille · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The second human beta-galactoside alpha-2,6-sialyltransferase (hST6Gal II) differs from hST6Gal I, the first member of ST6Gal family, in substrate specificity and tissue expression pattern. While ST6GAL1 gene is expressed in almost all human tissues, ST6GAL2 shows a restricted tissue-specific pattern of expression, mostly expressed in embryonic and adult brain. In order to understand the mechanisms involved in the transcriptional regulation of ST6GAL2, we first characterized the transcription start sites (TSS) in SH-SY5Y neuroblastoma cells. 5' RACE experiments revealed multiple TSS located on three first alternative 5' exons, termed EX, EY and EZ, which are unusually close on the genomic sequence and are all located more than 42 kbp upstream of the first common coding exon. Using Taqman duplex Q-PCR, we showed that the ST6GAL2 transcripts initiated by EX or EY are mainly expressed in both brain-related cell lines and human cerebral cortex, testifying for the use of a similar transcriptional regulation in vivo. Furthermore, we also showed for the first time hST6Gal II protein expression in the different lobes of the human cortex. Luciferase reporter assays allowed us to define two sequences upstream EX and EY with a high and moderate promoter activity, respectively. Bioinformatics analysis and site-directed mutagenesis showed that NF-kappaB and NRSF are likely to act as transcriptional repressors, whereas neuronal-related development factors Sox5, Puralpha and Olf1, are likely to act as transcriptional activators of ST6GAL2. This suggests that ST6GAL2 transcription could be potentially activated for specific neuronal functions.

Indexed as

Gene Expression Regulation, EnzymologicTranscription, Genetic5' Untranslated RegionsBase PairingBase SequenceBinding SitesCell Line, TumorCerebral CortexComputational BiologyEnzyme AssaysHumansLuciferasesMolecular Sequence DataMutagenesis, Site-DirectedNeuronsPolymerase Chain Reaction5' Untranslated RegionsLuciferasesRNA, MessengerSialyltransferasesST6GAL2 protein, humanTranscription Factors

Identifiers

PMID19768537
OpenAlexW2057071402

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.