Evidence map›Paper›PMID 19767753›Full record

ArticleNature genetics2009

Identification of seven new prostate cancer susceptibility loci through a genome-wide association study.

Rosalind A Eeles, Zsofia Kote-Jarai, Ali Amin Al Olama, Graham G Giles, Michelle Guy, Gianluca Severi, Kenneth Muir, John L Hopper, Brian E Henderson, Christopher A Haiman and 94 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 263 papers, 14 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
263citing papers in PubMed, 14 pooled it
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

263 citing papers in PubMed, 14 syntheses or guidelines pooled it, 18 citations in OpenAlex.

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  11. Genetic variation in prostate-specific antigen-detected prostate cancer and the effect of control selection on genetic association studies.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2014
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203 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

104 authors at 1 institution in 1 country.

Rosalind A EelesThe Institute of Cancer Research, Sutton, Surrey, UK.
Zsofia Kote-Jarai
Ali Amin Al Olama
Graham G Giles
Michelle Guy
Gianluca Severi
Kenneth Muir
John L Hopper
Brian E Henderson
Christopher A Haiman
Johanna Schleutker
Freddie C Hamdy
David E Neal
Jenny L Donovan
Janet L Stanford
Elaine A Ostrander
Sue A Ingles
Esther M John
Stephen N Thibodeau
Daniel Schaid
Jong Y Park
Amanda Spurdle
Judith Clements
Joanne L Dickinson
Christiane Maier
Walther Vogel
Thilo Dörk
Timothy R Rebbeck
Kathleen A Cooney
Lisa Cannon-Albright
Pierre O Chappuis
Pierre Hutter
Maurice Zeegers
Radka Kaneva
Hong-Wei Zhang
Yong-Jie Lu
William D Foulkes
Dallas R English
Daniel A Leongamornlert
Malgorzata Tymrakiewicz
Jonathan Morrison
Audrey T Ardern-Jones
Amanda L Hall
Lynne T O'Brien
Rosemary A Wilkinson
Edward J Saunders
Elizabeth C Page
Emma J Sawyer
Stephen M Edwards
David P Dearnaley
Alan Horwich
Robert A Huddart
Vincent S Khoo
Christopher C Parker
Nicholas Van As
Christopher J Woodhouse
Alan Thompson
Tim Christmas
Chris Ogden
Colin S Cooper
Melissa C Southey
Artitaya Lophatananon
Jo-Fen Liu
Laurence N Kolonel
Loic Le Marchand
Tiina Wahlfors
Teuvo L Tammela
Anssi Auvinen
Sarah J Lewis
Angela Cox
Liesel M FitzGerald
Joseph S Koopmeiners
Danielle M Karyadi
Erika M Kwon
Mariana C Stern
Roman Corral
Amit D Joshi
Ahva Shahabi
Shannon K McDonnell
Thomas A Sellers
Julio Pow-Sang
Suzanne Chambers
Joanne Aitken
R A Frank Gardiner
Jyotsna Batra
Mary Anne Kedda
Felicity Lose
Andrea Polanowski
Briony Patterson
Jürgen Serth
Andreas Meyer
Manuel Luedeke
Klara Stefflova
Anna M Ray
Ethan M Lange
Jim Farnham
Humera Khan
Chavdar Slavov
Atanaska Mitkova
Guangwen Cao
UK Genetic Prostate Cancer Study Collaborators/British Association of Urological Surgeons' Section of Oncology
UK ProtecT Study Collaborators
PRACTICAL Consortium
Douglas F Easton
Institute of Cancer Research · GB

Funding

TRANSCRIPTOME AND PROTEOME STRATIFICATION OF PROSTATE ADENOCARCINOMA PHENOTYPESP50CA097186 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI John Kyung Lee · 2002 to 2026
$58.1M
VACCINIA PSA FOR ANDROGEN-MODULATED POST-SURGICAL RECURRENCE OF PROSTATE CANCERP50CA069568 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COONEY, KATHLEEN A · 1995 to 2013
$31.3M
Prostate Cancer Susceptibility: The ICPCG StudyU01CA089600 · NCI · MAYO CLINIC ROCHESTER · PI THIBODEAU, STEPHEN NORMAN · 2002 to 2016
$27.3M
GENETIC SUSCEPTIBILITY TO CANCER IN MULTIETHNIC COHORTSR01CA063464 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HENDERSON, BRIAN E · 2001 to 2005
$23.2M
Multiethnic Cohort Study of Diet and CancerR37CA054281 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI KOLONEL, LAURENCE N. · 2003 to 2012
$23.2M
VIRAL DAMAGE TO BRAIN AND NEUROMUSCULAR SYSTEMM01RR000064 · NCRR · UNIVERSITY OF UTAH · PI SWOBODA, KATHRYN J. · 1985 to 2008
$21.7M
Finding Genes for Human Prostate CancerZIAHG200325 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI OSTRANDER, ELAINE · 2009 to 2021
$17.7M
Predoctoral Training Program in Human GeneticsT32GM007814 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 1985 to 2021
$10.6M
Segregation and Racial Disparities in Prostate CancerP50CA105641 · NCI · UNIVERSITY OF PENNSYLVANIA · PI REBBECK, TIMOTHY R · 2003 to 2009
$9.6M
MULTIETHNIC/MINORITY COHORT STUDY OF DIET AND CANCERR01CA054281 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI KOLONEL, LAURENCE N. · 1993 to 2002
$4.5M
NSAIDS and Other Medications in Prostate Cancer EtiologyR01CA092579 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 2001 to 2005
$3.2M
RISK FACTORS FOR ADVANCED PROSTATE CANCERR01CA084979 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI INGLES, SUE ANN · 1999 to 2003
$2.2M
Cancer Research UK 10118Cancer Research UK 10588Cancer Research UK 11022Cancer Research UK C1287/A10118Cancer Research UK C16913/A6135Cancer Research UK C16913/A6835Cancer Research UK C5047/A10692Cancer Research UK C5047/A3354Cancer Research UK C5047/A7357Cancer Research UK C522/A8649Department of HealthIntramural NIH HHSMedical Research Council G0500966Medical Research Council G0501019NCI NIH HHS CA54281NCI NIH HHS CA56678NCI NIH HHS CA63464NCI NIH HHS CA92579NCI NIH HHS CA97186NCI NIH HHS N01 PC035141NCI NIH HHS N01-PC-35141NCI NIH HHS P50 CA069568NCI NIH HHS P50 CA097186NCI NIH HHS P50 CA105641NCI NIH HHS R01 CA056678NCI NIH HHS R01 CA063464NCI NIH HHS R01 CA072818NCI NIH HHS R01 CA084979NCI NIH HHS R01 CA092579NCI NIH HHS R01 CA128813NCI NIH HHS R01CA128813NCI NIH HHS R01CA84979NCI NIH HHS R37 CA054281NCI NIH HHS U01 CA089600NCRR NIH HHS M01 RR000064NCRR NIH HHS M01 RR00064NIGMS NIH HHS T32 GM007814
6 · The paper itself

Abstract

Prostate cancer (PrCa) is the most frequently diagnosed cancer in males in developed countries. To identify common PrCa susceptibility alleles, we previously conducted a genome-wide association study in which 541,129 SNPs were genotyped in 1,854 PrCa cases with clinically detected disease and in 1,894 controls. We have now extended the study to evaluate promising associations in a second stage in which we genotyped 43,671 SNPs in 3,650 PrCa cases and 3,940 controls and in a third stage involving an additional 16,229 cases and 14,821 controls from 21 studies. In addition to replicating previous associations, we identified seven new prostate cancer susceptibility loci on chromosomes 2, 4, 8, 11 and 22 (with P = 1.6 x 10(-8) to P = 2.7 x 10(-33)).

Indexed as

Genome, HumanGenome-Wide Association StudyPolymorphism, Single NucleotideChromosomes, HumanDisease SusceptibilityGenotypeHumansMaleProstatic Neoplasms

Identifiers

PMID19767753
PMCPMC2846760
OpenAlexW1500048491

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.