Evidence map›Paper›PMID 19767347›Full record

ArticleMolecular biology and evolution2010

ZP domain proteins in the abalone egg coat include a paralog of VERL under positive selection that binds lysin and 18-kDa sperm proteins.

Jan E Aagaard, Victor D Vacquier, Michael J MacCoss, Willie J Swanson

Open access · bronzeAbstract read
In one paragraph

Article in Molecular biology and evolution, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 64 citations in OpenAlex.

  1. Review
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  12. Review
  13. Solution structure of sperm lysin yields novel insights into molecular dynamics of rapid protein evolution.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  14. Egg Coat Proteins Across Metazoan Evolution.Current topics in developmental biology · 2018
    Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jan E AagaardDepartment of Genome Sciences, University of Washington, USA. jaagaard@u.washington.edu
Victor D Vacquier
Michael J MacCoss
Willie J Swanson
University of Washington · USUniversity of California, San Diego · US

Funding

Global Identification of transcribed elements in the C. elegans genomeU01HG004263 · NHGRI · UNIVERSITY OF WASHINGTON · PI WATERSTON, ROBERT H · 2007 to 2011
$7.3M
BIOCHEMISTRY OF SPERM-EGG INTERACTION AND FERTILIZATIONR37HD012986 · NICHD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI VACQUIER, VICTOR D · 1997 to 2006
$3.1M
Population Genetics of Reproductive Protein DiversityR01HD042563 · NICHD · UNIVERSITY OF WASHINGTON · PI SWANSON, WILLIE J · 2003 to 2010
$2.4M
Analysis of Protein Dynamics in C. elegans by mLC/MS/MSR01DK069386 · NIDDK · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 2006 to 2013
$2.3M
Drosophila Seminal Fluid: Proteomic Discovery & Functional Variation AnalysesR01HD057974 · NICHD · UNIVERSITY OF WASHINGTON · PI SWANSON, WILLIE J · 2008 to 2012
$1.6M
Comparative genomics of mammalian seminal fluid genesR03HD054631 · NICHD · UNIVERSITY OF WASHINGTON · PI SWANSON, WILLIE J · 2007 to 2008
$154k
Analysis of Protein Dynamics in C. elegans by MULC/MS/MSR56DK069386 · NIDDK · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL J · 2005 to 2005
$81k
Evolution of Abalone Egg Coat ProteinsF32HD053185 · NICHD · UNIVERSITY OF WASHINGTON · PI AAGAARD, JAN E · 2007 to 2007
$50k
BIOCHEMISTRY OF SPERM-EGG INTERACTION AND FERTILIZATIONR01HD012986 · NICHD · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI VACQUIER, VICTOR D · 1985 to 1996
–
NHGRI NIH HHS HG004263NHGRI NIH HHS U01 HG004263NICHD NIH HHS F32 HD053185NICHD NIH HHS HD042563NICHD NIH HHS HD054631NICHD NIH HHS HD057974NICHD NIH HHS HD12986NICHD NIH HHS R01 HD042563NICHD NIH HHS R01 HD057974NICHD NIH HHS R03 HD054631NICHD NIH HHS R37 HD012986NIDDK NIH HHS DK069386NIDDK NIH HHS R01 DK069386NIDDK NIH HHS R56 DK069386PHS HHS FHD053185A
6 · The paper itself

Abstract

Identifying fertilization molecules is key to our understanding of reproductive biology, yet only a few examples of interacting sperm and egg proteins are known. One of the best characterized comes from the invertebrate archeogastropod abalone (Haliotis spp.), where sperm lysin mediates passage through the protective egg vitelline envelope (VE) by binding to the VE protein vitelline envelope receptor for lysin (VERL). Rapid adaptive divergence of abalone lysin and VERL are an example of positive selection on interacting fertilization proteins contributing to reproductive isolation. Previously, we characterized a subset of the abalone VE proteins that share a structural feature, the zona pellucida (ZP) domain, which is common to VERL and the egg envelopes of vertebrates. Here, we use additional expressed sequence tag sequencing and shotgun proteomics to characterize this family of proteins in the abalone egg VE. We expand 3-fold the number of known ZP domain proteins present within the VE (now 30 in total) and identify a paralog of VERL (vitelline envelope zona pellucida domain protein [VEZP] 14) that contains a putative lysin-binding motif. We find that, like VERL, the divergence of VEZP14 among abalone species is driven by positive selection on the lysin-binding motif alone and that these paralogous egg VE proteins bind a similar set of sperm proteins including a rapidly evolving 18-kDa paralog of lysin, which may mediate sperm-egg fusion. This work identifies an egg coat paralog of VERL under positive selection and the candidate sperm proteins with which it may interact during abalone fertilization.

Indexed as

AnimalsEgg ProteinsExpressed Sequence TagsFemaleGastropodaMaleModels, GeneticMucoproteinsNucleic Acid ConformationPeptide MappingPhylogenyProtein Structure, TertiaryReceptors, Cell SurfaceSelection, GeneticSpermatozoaSperm-Ovum InteractionsEgg Proteinslysin, gastropodaMucoproteinsReceptors, Cell SurfaceVERL protein, Haliotis

Identifiers

PMID19767347
PMCPMC2877556
OpenAlexW2131012709

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.