Evidence map›Paper›PMID 19763979›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2009

FRAP analysis of chemosensory components of Dictyostelium.

Carrie A Elzie, Chris Janetopoulos

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Carrie A ElzieDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, USA.
Chris Janetopoulos
Vanderbilt University · US

Funding

Inst.Research and Academic Career Development AwardK12GM068543 · NIGMS · VANDERBILT UNIVERSITY · PI CHALKLEY, G. ROGER · 2003 to 2009
$1.6M
PI(3,4,5)P3 Regulates Cell Polarity During Chemotaxis and CytokinesisR01GM080370 · NIGMS · VANDERBILT UNIVERSITY · PI JANETOPOULOS, CHRISTOPHER J · 2008 to 2012
$1.4M
NIGMS NIH HHS K12 GM068543NIGMS NIH HHS K12-GM068543NIGMS NIH HHS R01 GM080370NIGMS NIH HHS R01-GM080370
6 · The paper itself

Abstract

Dictyostelium discoideum is a useful cell model for studying protein-protein interactions and deciphering complex signaling pathways similar to those found in mammalian systems. Many of these interactions were analyzed using classical in vitro biochemical techniques. However, with the accessibility of fluorescently tagged proteins, extensive protein networks are now being mapped out in living cells using a variety of microscopic techniques. One such technique, fluorescent recovery after photobleaching (FRAP), has been used in Dictyostelium to investigate a number of cellular processes including actin and cytoskeleton dynamics during chemotaxis and cytokinesis (J. Muscle Res. Cell Motil. 23:639-649, 2002; Biophys. J. 81:2010-2019, 2001; Mol. Biol. Cell 16:4256-4266, 2005), to follow trafficking of proteins to organelles such as the membrane, nucleus, and endoplasmic reticulum (Development 130:797-804, 2003; J. Cell Biol. 154:137-146, 2001), and to understand the role of proteins in cell adhesion during motility and division (Mol. Biol. Cell 18:4074-4084, 2007; J. Cell Sci. 120:4302-4309, 2007). FRAP is a powerful tool that should provide a vast amount of information on the mobility of a number of proteins, not only in Dictyostelium, but in many organisms. This study will lay out the methods of conducting FRAP experiments in Dictyostelium and discuss the large amount of knowledge which can be gained by adopting this as a common technique.

Indexed as

ActinsAnimalsChemotaxisCytoskeletonDictyosteliumFluorescence Recovery After PhotobleachingProtozoan ProteinsActinsProtozoan Proteins

Identifiers

PMID19763979
PMCPMC3839318
OpenAlexW54136598

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.