Evidence map›Paper›PMID 19760665›Full record

ArticleProtein science : a publication of the Protein Society2009

Crystal structures of a therapeutic single chain antibody in complex with two drugs of abuse-Methamphetamine and 3,4-methylenedioxymethamphetamine.

Reha Celikel, Eric C Peterson, S Michael Owens, Kottayil I Varughese

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Reha CelikelDepartment of Physiology and Biophysics, College of Medicine, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.
Eric C Peterson
S Michael Owens
Kottayil I Varughese
University of Arkansas for Medical Sciences · US

Funding

ANTIBODY-BASED THERAPY FOR METHAMPHETAMINE ABUSER01DA011560 · NIDA · UNIV OF ARKANSAS FOR MED SCIS · PI OWENS, SAMUEL MICHAEL · 1998 to 2008
$3.6M
CRYSTAL STRUCTURE OF VON WILLEBRAND FACTOR A1 DOMAINR01HL055375 · NHLBI · UNIV OF ARKANSAS FOR MED SCIS · PI VARUGHESE, KOTTAYIL I · 1996 to 2007
$2.0M
Antibody-nanoparticle conjugates for the treatment of methamphetamine abuseR01DA026423 · NIDA · UNIV OF ARKANSAS FOR MED SCIS · PI PETERSON, ERIC C · 2009 to 2012
$1.5M
Single Chain Antibody Medications for(+)METH AbuseF32DA018039 · NIDA · UNIV OF ARKANSAS FOR MED SCIS · PI PETERSON, ERIC C · 2004 to 2006
$147k
NHLBI NIH HHS HL55375NIDA NIH HHS DA018039NIDA NIH HHS DA11560NIDA NIH HHS F32 DA018039NIDA NIH HHS R01 DA011560NIDA NIH HHS R01 DA026423
6 · The paper itself

Abstract

Methamphetamine (METH) is a major drug threat in the United States and worldwide. Monoclonal antibody (mAb) therapy for treating METH abuse is showing exciting promise and the understanding of how mAb structure relates to function will be essential for future development of these important therapies. We have determined crystal structures of a high affinity anti-(+)-METH therapeutic single chain antibody fragment (scFv6H4, K(D)= 10 nM) derived from one of our candidate mAb in complex with METH and the (+) stereoisomer of another abused drug, 3,4-methylenedioxymethamphetamine (MDMA), known by the street name "ecstasy." The crystal structures revealed that scFv6H4 binds to METH and MDMA in a deep pocket that almost completely encases the drugs mostly through aromatic interactions. In addition, the cationic nitrogen of METH and MDMA forms a salt bridge with the carboxylate group of a glutamic acid residue and a hydrogen bond with a histidine side chain. Interestingly, there are two water molecules in the binding pocket and one of them is positioned for a C--H...O interaction with the aromatic ring of METH. These first crystal structures of a high affinity therapeutic antibody fragment against METH and MDMA (resolution = 1.9 A, and 2.4 A, respectively) provide a structural basis for designing the next generation of higher affinity antibodies and also for carrying out rational humanization.

Indexed as

Amino Acid SequenceAntibodies, MonoclonalBinding Sites, AntibodyHydrophobic and Hydrophilic InteractionsIllicit DrugsImmunoglobulin Variable RegionMethamphetamineModels, MolecularMolecular Sequence DataN-Methyl-3,4-methylenedioxyamphetamineNuclear Magnetic Resonance, BiomolecularProtein BindingWaterAntibodies, MonoclonalIllicit DrugsImmunoglobulin Variable RegionMethamphetamineN-Methyl-3,4-methylenedioxyamphetamineWater

Identifiers

PMID19760665
PMCPMC2788288
OpenAlexW2042592888

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.