Evidence map›Paper›PMID 19759340›Full record

ArticlePlant physiology2009

Characterization of the entire cystatin gene family in barley and their target cathepsin L-like cysteine-proteases, partners in the hordein mobilization during seed germination.

Manuel Martinez, Ines Cambra, Laura Carrillo, Mercedes Diaz-Mendoza, Isabel Diaz

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
13.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 168 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Papain-like cysteine proteases inFrontiers in plant science · 2025
    Article
  7. Plant cathepsin B, a versatile protease.Frontiers in plant science · 2024
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. How Cysteine Protease GeneInternational journal of molecular sciences · 2021
    Article
  13. Genome-Wide Identification and Characterization of theInternational journal of molecular sciences · 2021
    Article
  14. Article
  15. Transcriptional control of local auxin distribution by the CsDFB1-CsPHB module regulates floral organogenesis in cucumber.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Manuel MartinezCentro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid, Campus Montegancedo Universidad Politécnica de Madrid, 28223-Pozuelo de Alarcón, Madrid, Spain.
Ines Cambra
Laura Carrillo
Mercedes Diaz-Mendoza
Isabel Diaz
Centre for Plant Biotechnology and Genomics · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant cystatins are inhibitors of cysteine-proteases of the papain C1A and legumain C13 families. Cystatin data from multiple plant species have suggested that these inhibitors act as defense proteins against pests and pathogens and as regulators of protein turnover. In this study, we characterize the entire cystatin gene family from barley (Hordeum vulgare), which contain 13 nonredundant genes, and identify and characterize their target enzymes, the barley cathepsin L-like proteases. Cystatins and proteases were expressed and purified from Escherichia coli cultures. Each cystatin was found to have different inhibitory capability against barley cysteine-proteases in in vitro inhibitory assays using specific substrates. Real-time reverse transcription-polymerase chain reaction revealed that inhibitors and enzymes present a wide variation in their messenger RNA expression patterns. Their transcripts were mainly detected in developing and germinating seeds, and some of them were also expressed in leaves and roots. Subcellular localization of cystatins and cathepsin L-like proteases fused to green fluorescent protein demonstrated the presence of both protein families throughout the endoplasmic reticulum and the Golgi complex. Proteases and cystatins not only colocalized but also interacted in vivo in the plant cell, as revealed by bimolecular fluorescence complementation. The functional relationship between cystatins and cathepsin L-like proteases was inferred from their common implication as counterparts of mobilization of storage proteins upon barley seed germination. The opposite pattern of transcription expression in gibberellin-treated aleurones presented by inhibitors and enzymes allowed proteases to specifically degrade B, C, and D hordeins stored in the endosperm of barley seeds.

Indexed as

Cathepsin LCystatinsCysteine Proteinase InhibitorsDNA, PlantEndoplasmic ReticulumGene Expression Regulation, PlantGenes, PlantGerminationGlutensGolgi ApparatusHordeumMultigene FamilyPhylogenyPlant ProteinsRecombinant ProteinsSeedsCathepsin LCystatinsCysteine Proteinase InhibitorsDNA, PlantGlutensPlant ProteinsRecombinant Proteins

Identifiers

PMID19759340
PMCPMC2773090
OpenAlexW1984163556

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.