Evidence map›Paper›PMID 19759313›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2009

Mapping a barbiturate withdrawal locus to a 0.44 Mb interval and analysis of a novel null mutant identify a role for Kcnj9 (GIRK3) in withdrawal from pentobarbital, zolpidem, and ethanol.

Laura B Kozell, Nicole A R Walter, Lauren C Milner, Kevin Wickman, Kari J Buck

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 58 citations in OpenAlex.

  1. Trial
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  4. bioRxiv : the preprint server for biology · 2024
    Article
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  10. Neuronal G protein-gated KAmerican journal of physiology. Cell physiology · 2022
    Review
  11. Article
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  15. G Protein-Gated Potassium Channels: A Link to Drug Addiction.Trends in pharmacological sciences · 2017
    Review
  16. Article
  17. Article
  18. Article
  19. A Role for the GIRK3 Subunit in Methamphetamine-Induced Attenuation of GABAB Receptor-Activated GIRK Currents in VTA Dopamine Neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Laura B KozellDepartment of Behavioral Neuroscience, Veterans Affairs Medical Center and Oregon Health & Science University, Portland, Oregon 97239-3098, USA.
Nicole A R Walter
Lauren C Milner
Kevin Wickman
Kari J Buck
Oregon Health & Science University · USUniversity of Minnesota · US

Funding

Translational measures of risk for excessive alcohol consumptionP60AA010760 · NIAAA · OREGON HEALTH & SCIENCE UNIVERSITY · PI Suzanne S. Fei · 2006 to 2026
$34.5M
Subcellular Targeting/Packaging of Opioids/ReceptorsP50DA011806 · NIDA · UNIVERSITY OF MINNESOTA TWIN CITIES · PI LOH, HORACE · 1998 to 2012
$14.0M
THERMAL AND METABOLIC DYSFUNCTION DURING WITHDRAWALP50AA010760 · NIAAA · OREGON HEALTH AND SCIENCE UNIVERSITY · PI CRABBE, JOHN C. · 1996 to 2005
$10.7M
GENETIC VULNERABILITY TO DRUGS OF ABUSER01DA005228 · NIDA · OREGON HEALTH & SCIENCE UNIVERSITY · PI BUCK, KARI J · 1989 to 2015
$4.6M
G protein-gated K+ channels and inhibitory signalingR01MH061933 · NIMH · UNIVERSITY OF MINNESOTA TWIN CITIES · PI WICKMAN, KEVIN D · 2001 to 2016
$4.4M
The Role of Mpdz in Ethanol Withdrawal and Genetically Correlated BehaviorsR01AA011114 · NIAAA · OREGON HEALTH & SCIENCE UNIVERSITY · PI BUCK, KARI J · 2000 to 2020
$4.3M
ETHANOL WITHDRAWAL QTLS AND CANDIDATE GENESR29AA011114 · NIAAA · OREGON HEALTH AND SCIENCE UNIVERSITY · PI BUCK, KARI J · 1997 to 1999
–
NIAAA NIH HHS AA011114NIAAA NIH HHS AA01731NIAAA NIH HHS AA10760NIAAA NIH HHS P50 AA010760NIAAA NIH HHS P60 AA010760NIAAA NIH HHS R01 AA011114NIAAA NIH HHS R29 AA011114NIDA NIH HHS DA011806NIDA NIH HHS DA05228NIDA NIH HHS P50 DA011806NIDA NIH HHS R01 DA005228NIMH NIH HHS MH61933NIMH NIH HHS R01 MH061933
6 · The paper itself

Abstract

Here, we map a quantitative trait locus (QTL) with a large effect on predisposition to barbiturate (pentobarbital) withdrawal to a 0.44 Mb interval of mouse chromosome 1 syntenic with human 1q23.2. We report a detailed analysis of the genes within this interval and show that it contains 15 known and predicted genes, 12 of which demonstrate validated genotype-dependent transcript expression and/or nonsynonymous coding sequence variation that may underlie the influence of the QTL on withdrawal. These candidates are involved in diverse cellular functions including intracellular trafficking, potassium conductance and spatial buffering, and multimolecular complex dynamics, and indicate both established and novel aspects of neurobiological response to sedative-hypnotics. This work represents a substantial advancement toward identification of the gene(s) that underlie the phenotypic effects of the QTL. We identify Kcnj9 as a particularly promising candidate and report the development of a Kcnj9-null mutant model that exhibits significantly less severe withdrawal from pentobarbital as well as other sedative-hypnotics (zolpidem and ethanol) versus wild-type littermates. Reduced expression of Kcnj9, which encodes GIRK3 (Kir3.3), is associated with less severe sedative-hypnotic withdrawal. A multitude of QTLs for a variety of complex traits, including diverse responses to sedative-hypnotics, have been detected on distal chromosome 1 in mice, and as many as four QTLs on human chromosome 1q have been implicated in human studies of alcohol dependence. Thus, our results will be primary to additional efforts to identify genes involved in a wide variety of behavioral responses to sedative-hypnotics and may directly facilitate progress in human genetics.

Indexed as

Chromosome MappingAnimalsArea Under CurveBehavior, AnimalBrainChromosomes, Human, Pair 1Disease Models, AnimalDNA Mutational AnalysisEthanolGene Expression RegulationGene FrequencyGenetic Predisposition to DiseaseGenotypeG Protein-Coupled Inwardly-Rectifying Potassium ChannelsHumansMiceEthanolG Protein-Coupled Inwardly-Rectifying Potassium ChannelsKcnj9 protein, mousePentobarbitalPyridinesZolpidem

Identifiers

PMID19759313
PMCPMC2813520
OpenAlexW2039147244

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.