Evidence map›Paper›PMID 19759211›Full record

ArticleNucleic acids research2009

The Staphylococcus aureus pSK41 plasmid-encoded ArtA protein is a master regulator of plasmid transmission genes and contains a RHH motif used in alternate DNA-binding modes.

Lisheng Ni, Slade O Jensen, Nam Ky Tonthat, Tracey Berg, Stephen M Kwong, Fiona H X Guan, Melissa H Brown, Ronald A Skurray, Neville Firth, Maria A Schumacher

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. The Plasmidomic Landscape of Clinical Methicillin-ResistantAntibiotics (Basel, Switzerland) · 2023
    Article
  3. Article
  4. Regulation of Gram-Positive Conjugation.Frontiers in microbiology · 2019
    Review
  5. Review
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Lisheng NiDepartment of Biochemistry and Molecular Biology, University of Texas, MD Anderson Cancer Center, Unit 1000, Houston, TX 77030, USA.
Slade O Jensen
Nam Ky Tonthat
Tracey Berg
Stephen M Kwong
Fiona H X Guan
Melissa H Brown
Ronald A Skurray
Neville Firth
Maria A Schumacher
The University of Texas MD Anderson Cancer Center · US

Funding

Structural studies on the Initiator protein, IBP39.R01GM068453 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI SCHUMACHER, MARIA · 2004 to 2008
$1.2M
NIGMS NIH HHS GM068453NIGMS NIH HHS R01 GM068453
6 · The paper itself

Abstract

Plasmids harbored by Staphylococcus aureus are a major contributor to the spread of bacterial multi-drug resistance. Plasmid conjugation and partition are critical to the dissemination and inheritance of such plasmids. Here, we demonstrate that the ArtA protein encoded by the S. aureus multi-resistance plasmid pSK41 is a global transcriptional regulator of pSK41 genes, including those involved in conjugation and segregation. ArtA shows no sequence homology to any structurally characterized DNA-binding protein. To elucidate the mechanism by which it specifically recognizes its DNA site, we obtained the structure of ArtA bound to its cognate operator, ACATGACATG. The structure reveals that ArtA is representative of a new family of ribbon-helix-helix (RHH) DNA-binding proteins that contain extended, N-terminal basic motifs. Strikingly, unlike most well-studied RHH proteins ArtA binds its cognate operators as a dimer. However, we demonstrate that it is also able to recognize an atypical operator site by binding as a dimer-of-dimers and the extended N-terminal regions of ArtA were shown to be essential for this dimer-of-dimer binding mode. Thus, these data indicate that ArtA is a master regulator of genes critical for both horizontal and vertical transmission of pSK41 and that it can recognize DNA utilizing alternate binding modes.

Indexed as

Amino Acid MotifsBacterial ProteinsDNADNA-Binding ProteinsModels, MolecularNucleic Acid ConformationOperator Regions, GeneticPlasmidsRegulonTranscription FactorsTranscription, GeneticArtA protein, Staphylococcus aureusBacterial ProteinsDNADNA-Binding ProteinsTranscription Factors

Identifiers

PMID19759211
PMCPMC2777438
OpenAlexW2096646490

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.