Evidence map›Paper›PMID 19759027›Full record

ArticleThe Journal of biological chemistry2009

Identification of the GATA factor TRPS1 as a repressor of the osteocalcin promoter.

Denise M Piscopo, Eric B Johansen, Rik Derynck

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 52 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Denise M PiscopoDepartment of Cell and Tissue Biology, Programs in Cell Biology and Developmental Biology, University of California, San Francisco, California 94143, USA.
Eric B Johansen
Rik Derynck
University of California, San Francisco · US

Funding

Translational InformaticsP30CA082103 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Jennifer Leigh Clarke · 1999 to 2026
$209.7M
TGF-Beta and Smad-mediated regulation of gene expressionR01CA063101 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DERYNCK, RIK M · 1995 to 2014
$6.4M
NCI NIH HHS CA63101NCI NIH HHS P30 CA082103NCI NIH HHS P30 CA82103NCI NIH HHS R01 CA063101
6 · The paper itself

Abstract

A proteomic analysis of proteins bound to the osteocalcin OSE2 sequence of the mouse osteocalcin promoter identified TRPS1 as a regulator of osteocalcin transcription. Mutations in the TRPS1 gene are responsible for human tricho-rhino-phalangeal syndrome, which is characterized by skeletal and craniofacial abnormalities. TRPS1 has been shown to bind regulatory promoter sequences containing GATA consensus binding sites and to repress transcription of genes involved in chondrocyte differentiation. Here we show that TRPS1 can directly bind the osteocalcin promoter in the presence or absence of Runx2. TRPS1 binds through a GATA binding sequence in the proximal promoter of the osteocalcin gene. The GATA binding site is conserved in mice, humans, and rats, although its location and orientation are not. Mutation of the mouse or human GATA binding sequence abrogates binding of TRPS1 to the osteocalcin promoter. We show that TRPS1 is expressed in osteosarcoma cells and upon induction of osteoblast differentiation in primary mouse bone marrow stromal cells and that TRPS1 regulates the expression of osteocalcin in both cell types. The expression of TRPS1 modulates mineralized bone matrix formation in differentiating osteoblast cells. These data suggest a role for TRPS1 in osteoblast differentiation, in addition to its previously described role in chondrogenesis.

Indexed as

Gene Expression RegulationAndrogensAnimalsBinding SitesBlotting, WesternBone Density Conservation AgentsBone MarrowBone NeoplasmsCalcification, PhysiologicCell DifferentiationCells, CulturedCholecalciferolChromatin ImmunoprecipitationChromatography, LiquidCore Binding Factor Alpha 1 SubunitDNA-Binding ProteinsAndrogensBone Density Conservation AgentsCholecalciferolCore Binding Factor Alpha 1 SubunitDNA-Binding ProteinsDNA, NeoplasmDNA PrimersGATA Transcription FactorsLuciferasesOsteocalcinRepressor ProteinsRNA, MessengerRNA, Small InterferingTranscription FactorsTRPS1 protein, humanTrps1 protein, mouse

Identifiers

PMID19759027
PMCPMC2797240
OpenAlexW2159531143

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.