Evidence map›Paper›PMID 1975239›Full record

ArticleThe EMBO journal1990

Molecular analysis of the bicoid gene from Drosophila pseudoobscura: identification of conserved domains within coding and noncoding regions of the bicoid mRNA.

M A Seeger, T C Kaufman

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The EMBO journal, 1990. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 71 citations in OpenAlex.

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  8. exl protein specifically binds BLE1, a bicoid mRNA localization element, and is required for one phase of its activity.Proceedings of the National Academy of Sciences of the United States of America · 1995
    Article
  9. Conservation and function of the transcriptional regulatory protein Runt.Proceedings of the National Academy of Sciences of the United States of America · 1995
    Article
  10. Transdifferentiation of chicken embryonic cells into muscle cells by the 3' untranslated region of muscle tropomyosin.Proceedings of the National Academy of Sciences of the United States of America · 1995
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

M A SeegerHoward Hughes Medical Institute, Department of Biology, Indiana University, Bloomington 47405.
T C Kaufman
Howard Hughes Medical Institute · US

Funding

TRAINING IN GENETICST32GM007757 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI KUMAR, JUSTIN P · 1985 to 2014
$8.1M
THE GENETIC CONTROL OF MORPHOGENESISR01GM024299 · NIGMS · INDIANA UNIVERSITY BLOOMINGTON · PI KAUFMAN, THOMAS C · 1985 to 1992
–
NIGMS NIH HHS GM07757NIGMS NIH HHS GM24299
6 · The paper itself

Abstract

The specification of anterior positional information during Drosophila embryogenesis is largely dependent upon the function of the maternal-effect gene bicoid (bcd). Two aspects of bcd function are particularly striking. First, the bcd protein product forms a gradient during early embryogenesis, which regulates the transcription of at least one zygotic segmentation gene, hunchback, in a concentration dependent manner. Secondly, formation of the bcd protein gradient is dependent upon the specific localization of bcd mRNAs at the anterior end of the oocyte/embryo during oogenesis, a process which requires a cis-acting 625 nucleotide sequence within the 3' untranslated region of the bcd mRNA. We have cloned and sequenced the bcd gene from Drosophila pseudoobscura as a tool in identifying important functional domains within this transcription unit. DNA sequence comparisons reveal: (i) varying degrees of amino acid sequence conservation among the proposed functional domains of the bcd protein, (ii) the conservation of potential RNA secondary structures within the bcd mRNA localization element, and (iii) the maintenance of a short open reading frame within the 5' untranslated leader that may play a role in translational regulation. Finally, the D.pseudoobscura bcd gene partially rescues the phenotype of a bcd- mutation when placed into the D.melanogaster genome by germline transformation. The lack of full phenotypic rescue can be explained in part by the observed improper localization of the D.pseudoobscura bcd mRNA when expressed in D.melanogaster.

Indexed as

Genes, HomeoboxAmino Acid SequenceAnimalsBase CompositionBase SequenceCloning, MolecularDrosophilaDrosophila melanogasterGene LibraryMolecular Sequence DataMutationNucleic Acid ConformationPhenotypeRestriction MappingRNA, MessengerSequence Homology, Nucleic AcidRNA, Messenger

Identifiers

PMID1975239
PMCPMC552015
OpenAlexW113030814

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.