Evidence map›Paper›PMID 19750511›Full record

ArticleProteomics2009

An improved strategy for tandem affinity purification-tagging of Schizosaccharomyces pombe genes.

Lubos Cipak, Mario Spirek, Maria Novatchkova, Zhiming Chen, Cornelia Rumpf, Wolfgang Lugmayr, Karl Mechtler, Gustav Ammerer, Edina Csaszar, Juraj Gregan

Abstract read
In one paragraph

Article in Proteomics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Lubos CipakMax F. Perutz Laboratories, University of Vienna, Vienna, Austria.
Mario Spirek
Maria Novatchkova
Zhiming Chen
Cornelia Rumpf
Wolfgang Lugmayr
Karl Mechtler
Gustav Ammerer
Edina Csaszar
Juraj Gregan

Funding

Austrian Science Fund FWF F 3403Austrian Science Fund FWF P 18955Austrian Science Fund FWF P 20444
6 · The paper itself

Abstract

Tandem affinity purification (TAP) is a method that allows rapid purification of native protein complexes. We developed an improved technique to fuse the fission yeast genes with a TAP tag. Our technique is based on tagging constructs that contain regions homologous to the target gene cloned into vectors carrying a TAP tag. We used this technique to design strategies for TAP-tagging of predicted Schizosaccharomyces pombe genes (http://mendel.imp.ac.at/Pombe_tagging/). To validate the approach, we purified the proteins, which associated with two evolutionarily conserved proteins Swi5 and Sfr1 as well as three protein kinases Ksg1, Orb6 and Sid1.

Indexed as

Chromatography, AffinityRecombinant ProteinsSchizosaccharomycesSchizosaccharomyces pombe ProteinsRecombinant ProteinsSchizosaccharomyces pombe Proteins

Identifiers

PMID19750511
PMCPMC2956173

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.