Evidence map›Paper›PMID 19749757›Full record

ArticleNature genetics2009

Genome-wide association of IL28B with response to pegylated interferon-alpha and ribavirin therapy for chronic hepatitis C.

Yasuhito Tanaka, Nao Nishida, Masaya Sugiyama, Masayuki Kurosaki, Kentaro Matsuura, Naoya Sakamoto, Mina Nakagawa, Masaaki Korenaga, Keisuke Hino, Shuhei Hige and 19 more

4 registry-linked trialsAbstract read
PubMed Publisher
In one paragraph

Article in Nature genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 4 registered trials, which are not on this map. Cited by 870 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
870citing papers in PubMed, 6 pooled it
130.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01437969 completednot on this mapstarted 2011, after this paper: background citation

Pharmacogenomics Study on IL28B Genetic Variants in Italian Patients With HCV Chronic Infection naïve to Antiviral Treatment.

TypeobservationalSponsorCasa Sollievo della Sofferenza IRCCSRan2011 to 2022Enrolled500ConditionsLiver DiseaseArmsgenotyping and/or sequencing
NCT01707849 phase3completednot on this mapstarted 2012, after this paper: background citation

An Unicenter, Prospective, Randomized, Pilot Study Comparing the Effect of Everolimus-containing Versus mTOR Inhibitor Free Immunosuppression in the Evolution of Hepatitis C Fibrosis After Liver Transplantation.

TypeinterventionalSponsorHospital Vall d'HebronRan2012 to 2016Enrolled18ConditionsHepatitis C Recurrence After Liver TransplantArmsEVL arm, MMF arm
NCT02527291 completednot on this mapstarted 2015, after this paper: background citation

Cytomegalovirus Reactivation in Non Immunocompromised Patients Undergoing Cardiac Surgery

TypeobservationalSponsorSoroka University Medical CenterRan2015 to 2017Enrolled30ConditionsCardiac SurgeryArmsBlood test
NCT03090035 phase3completednot on this mapstarted 2014, after this paper: background citation

Impact of Interleukin 28B (rs12979860) Genotype on Virological Responses in Chronic Hepatitis C Treatment

TypeinterventionalSponsorSheikh Zayed Medical CollegeRan2014 to 2014Enrolled98ConditionsHepatitis C, Hepatitis C RelapseArmsPegylated Interferon α2, Ribavirin
3 · Its place in the literature

Who cites it

870 citing papers in PubMed, 6 syntheses or guidelines pooled it, 2,134 citations in OpenAlex.

  1. Pooled it
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  3. Virulence · 2022
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  20. Human immunity.Journal of human immunity · 2025
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810 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

29 authors at 16 institutions in 1 country.

Yasuhito TanakaDepartment of Clinical Molecular Informative Medicine, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan.
Nao Nishida
Masaya Sugiyama
Masayuki Kurosaki
Kentaro Matsuura
Naoya Sakamoto
Mina Nakagawa
Masaaki Korenaga
Keisuke Hino
Shuhei Hige
Yoshito Ito
Eiji Mita
Eiji Tanaka
Satoshi Mochida
Yoshikazu Murawaki
Masao Honda
Akito Sakai
Yoichi Hiasa
Shuhei Nishiguchi
Asako Koike
Isao Sakaida
Masatoshi Imamura
Kiyoaki Ito
Koji Yano
Naohiko Masaki
Fuminaka Sugauchi
Namiki Izumi
Katsushi Tokunaga
Masashi Mizokami
Nagoya City University · JPKanazawa University · JPKawasaki Medical School · JPMusashino Red Cross Hospital · JPThe University of Tokyo · JPTokyo Medical and Dental University · JPEhime University · JPHitachi (Japan) · JPHokkaido University · JPHyogo Medical University · JPKyoto Prefectural University of Medicine · JPOsaka National Hospital · JPSaitama Medical University · JPShinshu University · JPTottori University · JPYamaguchi University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The recommended treatment for patients with chronic hepatitis C, pegylated interferon-alpha (PEG-IFN-alpha) plus ribavirin (RBV), does not provide sustained virologic response (SVR) in all patients. We report a genome-wide association study (GWAS) to null virological response (NVR) in the treatment of patients with hepatitis C virus (HCV) genotype 1 within a Japanese population. We found two SNPs near the gene IL28B on chromosome 19 to be strongly associated with NVR (rs12980275, P = 1.93 x 10(-13), and rs8099917, 3.11 x 10(-15)). We replicated these associations in an independent cohort (combined P values, 2.84 x 10(-27) (OR = 17.7; 95% CI = 10.0-31.3) and 2.68 x 10(-32) (OR = 27.1; 95% CI = 14.6-50.3), respectively). Compared to NVR, these SNPs were also associated with SVR (rs12980275, P = 3.99 x 10(-24), and rs8099917, P = 1.11 x 10(-27)). In further fine mapping of the region, seven SNPs (rs8105790, rs11881222, rs8103142, rs28416813, rs4803219, rs8099917 and rs7248668) located in the IL28B region showed the most significant associations (P = 5.52 x 10(-28)-2.68 x 10(-32); OR = 22.3-27.1). Real-time quantitative PCR assays in peripheral blood mononuclear cells showed lower IL28B expression levels in individuals carrying the minor alleles (P = 0.015).

Indexed as

Genome-Wide Association StudyPolymorphism, Single NucleotideAllelesAntiviral AgentsAsian PeopleChromosomes, Human, Pair 19Drug CombinationsFemaleGenome, HumanHaplotypesHepatitis C, ChronicHumansInterferon-alphaInterferon LambdaInterferonsInterleukinsAntiviral AgentsDrug CombinationsInterferon-alphaInterferon Lambdainterferon-lambda, humanInterferonsInterleukinsRibavirin

Identifiers

PMID19749757
OpenAlexW2026614040

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.