Evidence map›Paper›PMID 19749060›Full record

ArticleApplied and environmental microbiology2009

Diverse enterotoxin gene profiles among clonal complexes of Staphylococcus aureus isolates from the Bronx, New York.

Avanish K Varshney, José R Mediavilla, Natalie Robiou, Alice Guh, Xiabo Wang, Philip Gialanella, Michael H Levi, Barry N Kreiswirth, Bettina C Fries

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 104 citations in OpenAlex.

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  18. Characterization of enterotoxin A-producingInfection and drug resistance · 2018
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  20. Prevalence and Characterization ofFrontiers in microbiology · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Avanish K VarshneyDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
José R Mediavilla
Natalie Robiou
Alice Guh
Xiabo Wang
Philip Gialanella
Michael H Levi
Barry N Kreiswirth
Bettina C Fries
Albert Einstein College of Medicine · USMontefiore Medical Center · USInternational Center for Public Health · USFordham University · US

Funding

Viral Pathogenesis and TherapeuticsU54AI057158 · NIAID · WADSWORTH CENTER · PI LIPKIN, W. IAN · 2003 to 2014
$100.8M
NIAID NIH HHS U54 AI057158NIAID NIH HHS U54-AI5718
6 · The paper itself

Abstract

Staphylococcal enterotoxins (SE) can cause toxin-mediated disease, and those that function as superantigens are implicated in the pathogenesis of allergic diseases. The prevalence of 19 enterotoxin genes was determined by PCR in clinical S. aureus strains derived from wounds (108) and blood (99). We performed spa typing and multilocus sequence typing (MLST) to determine clonal origin, and for selected strains staphylococcal enterotoxin B (SEB) production was measured by enzyme-linked immunosorbent assay. Strains carried a median of five SE genes. For most SE genes, the prevalence rates among methicillin-resistant and methicillin-sensitive S. aureus isolates, as well as wound- and blood-derived isolates, did not differ. At least one SE gene was detected in all except two S. aureus isolates (>99%). Complete egc clusters were found in only 11% of S. aureus isolates, whereas the combination of sed, sej, and ser was detected in 24% of clinical strains. S. aureus strains exhibited distinct combinations of SE genes, even if their pulsed-field gel electrophoresis and MLST patterns demonstrated clonality. USA300 strains also showed considerable variability in SE content, although they contained a lower number of SE genes (mean, 3). By contrast, SE content was unchanged in five pairs of serial isolates. SEB production by individual strains varied up to 200-fold, and even up to 15-fold in a pair of serial isolates. In conclusion, our results illustrate the genetic diversity of S. aureus strains with respect to enterotoxin genes and suggest that horizontal transfer of mobile genetic elements encoding virulence genes occurs frequently.

Indexed as

Genetic VariationBacteremiaBacterial ProteinsBacterial Typing TechniquesCluster AnalysisDNA, BacterialDNA FingerprintingElectrophoresis, Gel, Pulsed-FieldEnterotoxinsEnzyme-Linked Immunosorbent AssayGenotypeMolecular EpidemiologyNew YorkPolymerase Chain ReactionSequence Analysis, DNAStaphylococcal InfectionsBacterial ProteinsDNA, BacterialEnterotoxins

Identifiers

PMID19749060
PMCPMC2772442
OpenAlexW2110695024

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.