Evidence map›Paper›PMID 19749055›Full record

ArticleJournal of bacteriology2009

Global transcriptional response to spermine, a component of the intramacrophage environment, reveals regulation of Francisella gene expression through insertion sequence elements.

Paul E Carlson, Joseph Horzempa, Dawn M O'Dee, Cory M Robinson, Panayiotis Neophytou, Alexandros Labrinidis, Gerard J Nau

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 49 citations in OpenAlex.

  1. Spermidine biosynthesis by hypervirulentJournal of bacteriology · 2026
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  11. A predictedVirulence · 2019
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  14. Glycosylation of a Capsule-Like Complex (CLC) byFrontiers in microbiology · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Paul E CarlsonDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Joseph Horzempa
Dawn M O'Dee
Cory M Robinson
Panayiotis Neophytou
Alexandros Labrinidis
Gerard J Nau
Office of Infectious Diseases · USUniversity of Pittsburgh · US

Funding

Immunology of Infectious DiseaseT32AI060525 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JoAnne L. Flynn · 2005 to 2026
$5.3M
Novel Selectable Markers for F. tularensisR21AI074402 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI NAU, GERARD J · 2007 to 2008
$393k
NIAID NIH HHS AI050018NIAID NIH HHS AI074402NIAID NIH HHS N01 AI050018NIAID NIH HHS R21 AI074402NIAID NIH HHS T32 AI060525
6 · The paper itself

Abstract

Tularemia is caused by the category A biodefense agent Francisella tularensis. This bacterium is associated with diverse environments and a plethora of arthropod and mammalian hosts. How F. tularensis adapts to these different conditions, particularly the eukaryotic intracellular environment in which it replicates, is poorly understood. Here, we demonstrate that the polyamines spermine and spermidine are environmental signals that alter bacterial stimulation of host cells. Genomewide analysis showed that F. tularensis LVS undergoes considerable changes in gene expression in response to spermine. Unexpectedly, analysis of gene expression showed that multiple members of two classes of Francisella insertion sequence (IS) elements, ISFtu1 and ISFtu2, and the genes adjacent to these elements were induced by spermine. Spermine was sufficient to activate transcription of these IS elements and of nearby genes in broth culture and in macrophages. Importantly, the virulent strain of F. tularensis, Schu S4, exhibited similar phenotypes of cytokine induction and gene regulation in response to spermine. Distinctions in gene expression changes between Schu S4 and LVS at one orthologous locus, however, correlated with differences in IS element location. Our results indicate that spermine and spermidine are novel triggers to alert F. tularensis of its eukaryotic host environment. The results reported here also identify an unexpected mechanism of gene regulation controlled by a spermine-responsive promoter contained within IS elements. Different arrangements of these mobile genetic elements among Francisella strains may contribute to virulence by conveying new expression patterns for genes from different strains.

Indexed as

Gene Expression Regulation, BacterialDNA Transposable ElementsEnzyme-Linked Immunosorbent AssayFrancisella tularensisMacrophagesOligonucleotide Array Sequence AnalysisPolymerase Chain ReactionPromoter Regions, GeneticSpermineTularemiaVirulenceDNA Transposable ElementsSpermine

Identifiers

PMID19749055
PMCPMC2772466
OpenAlexW2040006736

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.