Evidence map›Paper›PMID 19748917›Full record

ArticlePlant physiology2009

Arabidopsis LON2 is necessary for peroxisomal function and sustained matrix protein import.

Matthew J Lingard, Bonnie Bartel

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Plant Peroxisomes: A Factory of Reactive Species.Frontiers in plant science · 2020
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. APlant direct · 2019
    Article
  16. Review
  17. AProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Matthew J LingardDepartment of Biochemistry, Rice University, Houston, Texas 77005, USA.
Bonnie Bartel
Rice University · US

Funding

Using Arabidopsis to uncover new roles for peroxinsR01GM079177 · NIGMS · RICE UNIVERSITY · PI BARTEL, BONNIE · 2009 to 2017
$2.4M
NIGMS NIH HHS R01 GM079177NIGMS NIH HHS R01GM079177
6 · The paper itself

Abstract

Relatively little is known about the small subset of peroxisomal proteins with predicted protease activity. Here, we report that the peroxisomal LON2 (At5g47040) protease facilitates matrix protein import into Arabidopsis (Arabidopsis thaliana) peroxisomes. We identified T-DNA insertion alleles disrupted in five of the nine confirmed or predicted peroxisomal proteases and found only two-lon2 and deg15, a mutant defective in the previously described PTS2-processing protease (DEG15/At1g28320)-with phenotypes suggestive of peroxisome metabolism defects. Both lon2 and deg15 mutants were mildly resistant to the inhibitory effects of indole-3-butyric acid (IBA) on root elongation, but only lon2 mutants were resistant to the stimulatory effects of IBA on lateral root production or displayed Suc dependence during seedling growth. lon2 mutants displayed defects in removing the type 2 peroxisome targeting signal (PTS2) from peroxisomal malate dehydrogenase and reduced accumulation of 3-ketoacyl-CoA thiolase, another PTS2-containing protein; both defects were not apparent upon germination but appeared in 5- to 8-d-old seedlings. In lon2 cotyledon cells, matrix proteins were localized to peroxisomes in 4-d-old seedlings but mislocalized to the cytosol in 8-d-old seedlings. Moreover, a PTS2-GFP reporter sorted to peroxisomes in lon2 root tip cells but was largely cytosolic in more mature root cells. Our results indicate that LON2 is needed for sustained matrix protein import into peroxisomes. The delayed onset of matrix protein sorting defects may account for the relatively weak Suc dependence following germination, moderate IBA-resistant primary root elongation, and severe defects in IBA-induced lateral root formation observed in lon2 mutants.

Indexed as

ArabidopsisArabidopsis ProteinsATP-Dependent ProteasesDNA, BacterialGene Expression Regulation, PlantIndolesPeptide HydrolasesPeroxisomal Targeting Signal 2 ReceptorPeroxisomesPlant RootsProtein TransportReceptors, Cytoplasmic and NuclearSerine EndopeptidasesArabidopsis ProteinsATP-Dependent ProteasesDeg15 protein, ArabidopsisDNA, Bacterialindolebutyric acidIndolesLON2 protein, ArabidopsisPeptide HydrolasesPeroxisomal Targeting Signal 2 ReceptorReceptors, Cytoplasmic and NuclearSerine EndopeptidasesT-DNA

Identifiers

PMID19748917
PMCPMC2773057
OpenAlexW2095901918

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.