Evidence map›Paper›PMID 19745116›Full record

ArticleScience (New York, N.Y.)2009

RNAi in budding yeast.

Ines A Drinnenberg, David E Weinberg, Kathleen T Xie, Jeffrey P Mower, Kenneth H Wolfe, Gerald R Fink, David P Bartel

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 315 papers.

0numbers the graph read from it
0cells of the map it votes in
315citing papers in PubMed
14.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

315 citing papers in PubMed, 516 citations in OpenAlex.

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255 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Ines A Drinnenberg *Whitehead Institute for Biomedical Research, 9 Cambridge Center, Cambridge, MA 02142, USA.
David E Weinberg *Whitehead Institute for Biomedical Research, 9 Cambridge Center, Cambridge, MA 02142, USA.
Kathleen T Xie *Whitehead Institute for Biomedical Research, 9 Cambridge Center, Cambridge, MA 02142, USA.
Jeffrey P MowerSmurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland.
Kenneth H WolfeSmurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland.
Gerald R FinkWhitehead Institute for Biomedical Research, 9 Cambridge Center, Cambridge, MA 02142, USA.
David P BartelWhitehead Institute for Biomedical Research, 9 Cambridge Center, Cambridge, MA 02142, USA.
Whitehead Institute for Biomedical Research · USTrinity College Dublin · IEHoward Hughes Medical Institute · US

Funding

The Role of Genetic Variation in the Fungal/Host InteractionR01GM040266 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI FINK, GERALD R · 1988 to 2012
$8.6M
MicroRNA genes and their functionsR01GM067031 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI BARTEL, DAVID P · 2002 to 2015
$7.3M
Howard Hughes Medical InstituteNIGMS NIH HHS GM0305010NIGMS NIH HHS GM040266NIGMS NIH HHS GM067031NIGMS NIH HHS R01 GM040266NIGMS NIH HHS R01 GM067031
6 · The paper itself

Abstract

RNA interference (RNAi), a gene-silencing pathway triggered by double-stranded RNA, is conserved in diverse eukaryotic species but has been lost in the model budding yeast Saccharomyces cerevisiae. Here, we show that RNAi is present in other budding yeast species, including Saccharomyces castellii and Candida albicans. These species use noncanonical Dicer proteins to generate small interfering RNAs, which mostly correspond to transposable elements and Y' subtelomeric repeats. In S. castellii, RNAi mutants are viable but have excess Y' messenger RNA levels. In S. cerevisiae, introducing Dicer and Argonaute of S. castellii restores RNAi, and the reconstituted pathway silences endogenous retrotransposons. These results identify a previously unknown class of Dicer proteins, bring the tool of RNAi to the study of budding yeasts, and bring the tools of budding yeast to the study of RNAi.

Indexed as

RNA InterferenceFungal ProteinsGene Expression ProfilingGenes, FungalGenetic LociMutationOpen Reading FramesRepetitive Sequences, Nucleic AcidRetroelementsRibonuclease IIIRNA, Double-StrandedRNA, FungalRNA, MessengerRNA, Small InterferingSaccharomycesSaccharomyces cerevisiaeFungal ProteinsRetroelementsRibonuclease IIIRNA, Double-StrandedRNA, FungalRNA, MessengerRNA, Small InterferingSaccharomyces cerevisiae Proteins

Identifiers

PMID19745116
PMCPMC3786161
OpenAlexW1499220571

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.