Evidence map›Paper›PMID 19742322›Full record

ArticlePloS one2009

Insulin gene expression is regulated by DNA methylation.

Akio Kuroda, Tibor A Rauch, Ivan Todorov, Hsun Teresa Ku, Ismail H Al-Abdullah, Fouad Kandeel, Yoko Mullen, Gerd P Pfeifer, Kevin Ferreri

Erratum issued Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT01663298 (FGF2 Promoter Hypermethylation and Implant Wound Healing Among Smokers and Diabetics), which is not on this map. Cited by 157 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
157citing papers in PubMed, 1 pooled it
16.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01663298 completednot on this mapstarted 2010, after this paper: background citation

FGF2 Promoter Hypermethylation and Implant Wound Healing Among Smokers and Diabetics

TypeobservationalSponsorUniversity of North Carolina, Chapel HillRan2010 to 2016Enrolled44ConditionsSmoking, DiabetesArmsDental implant surgery
3 · Its place in the literature

Who cites it

157 citing papers in PubMed, 1 synthesis or guideline pooled it, 306 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Review
  5. Article
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  15. Systematic and proactive evaluation of AIRE missense variant effects.bioRxiv : the preprint server for biology · 2025
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  18. Comprehending the Epidemiology and Aetiology of Childhood Obesity: Integrating Life Course Approaches for Prevention and Intervention.Diabetes therapy : research, treatment and education of diabetes and related disorders · 2025
    Review
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  20. Review

97 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Akio KurodaDepartment of Diabetes, Endocrinology, & Metabolism, Research Institute of City of Hope, Duarte, California, United States of America.
Tibor A Rauch
Ivan Todorov
Hsun Teresa Ku
Ismail H Al-Abdullah
Fouad Kandeel
Yoko Mullen
Gerd P Pfeifer
Kevin Ferreri
City of Hope · USBeckman Research Institute

Funding

SOUTHERN CALIFORNIA ISLET CELL RESOURCES (SCI-ICR) CENTERU42RR016607 · NCRR · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI RIGGS, ARTHUR D · 2001 to 2009
$6.6M
ISLET-KIDNEY TRANSPLANTATION FOR TYPE I DIABETESR01DK056952 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KANDEEL, FOUAD · 2000 to 2006
$4.3M
Insulin-Expressing Colony Forming ProgenitorsR01DK081587 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI KU, HSUN TERESA · 2008 to 2012
$1.7M
NCRR NIH HHS U42 RR016607NCRR NIH HHS U42 RR16607NIDDK NIH HHS 5R01DK081587-01NIDDK NIH HHS DK056952NIDDK NIH HHS R01 DK056952NIDDK NIH HHS R01 DK081587
6 · The paper itself

Abstract

backgroundInsulin is a critical component of metabolic control, and as such, insulin gene expression has been the focus of extensive study. DNA sequences that regulate transcription of the insulin gene and the majority of regulatory factors have already been identified. However, only recently have other components of insulin gene expression been investigated, and in this study we examine the role of DNA methylation in the regulation of mouse and human insulin gene expression. METHODOLOGY/PRINCIPAL

findingsGenomic DNA samples from several tissues were bisulfite-treated and sequenced which revealed that cytosine-guanosine dinucleotide (CpG) sites in both the mouse Ins2 and human INS promoters are uniquely demethylated in insulin-producing pancreatic beta cells. Methylation of these CpG sites suppressed insulin promoter-driven reporter gene activity by almost 90% and specific methylation of the CpG site in the cAMP responsive element (CRE) in the promoter alone suppressed insulin promoter activity by 50%. Methylation did not directly inhibit factor binding to the CRE in vitro, but inhibited ATF2 and CREB binding in vivo and conversely increased the binding of methyl CpG binding protein 2 (MeCP2). Examination of the Ins2 gene in mouse embryonic stem cell cultures revealed that it is fully methylated and becomes demethylated as the cells differentiate into insulin-expressing cells in vitro. CONCLUSIONS/SIGNIFICANCE: Our findings suggest that insulin promoter CpG demethylation may play a crucial role in beta cell maturation and tissue-specific insulin gene expression.

Indexed as

DNA MethylationGene Expression RegulationAnimalsCell DifferentiationCells, CulturedCpG IslandsDNA PrimersEmbryonic Stem CellsEpigenesis, GeneticHumansInsulinInsulin-Secreting CellsMiceModels, BiologicalModels, GeneticPromoter Regions, GeneticDNA PrimersInsulin

Identifiers

PMID19742322
PMCPMC2735004
OpenAlexW1963929665

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.