Evidence map›Paper›PMID 19742166›Full record

ArticleInternational journal of environmental research and public health2009

Epistasis between IL1A, IL1B, TNF, HTR2A, 5-HTTLPR and TPH2 variations does not impact alcohol dependence disorder features.

Antonio Drago, Ioannis Liappas, Carmine Petio, Diego Albani, Gianluigi Forloni, Petros Malitas, Christina Piperi, Antonis Politis, Elias O Tzavellas, Katerina K Zisaki and 7 more

Abstract read
In one paragraph

Article in International journal of environmental research and public health, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Multi-cultural association of the serotonin transporter gene (SLC6A4) with substance use disorder.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2013
    Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. A candidate gene association study of alcohol consumption in young women.Alcoholism, clinical and experimental research · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Antonio DragoInstitute of Psychiatry, University of Bologna, Italy. antonio.drago@unibo.it
Ioannis Liappas
Carmine Petio
Diego Albani
Gianluigi Forloni
Petros Malitas
Christina Piperi
Antonis Politis
Elias O Tzavellas
Katerina K Zisaki
Francesca Prato
Sara Batelli
Letizia Polito
Diana De Ronchi
Thomas Paparrigopoulos
Anastasios Kalofoutis
Alessandro Serretti

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We assessed a set of biological (HDL, LDL, SGOT, SGPT, GGT, HTc, Hb and T levels) and psychometric variables (investigated through HAM-D, HAM-A, GAS, Liebowitz Social Anxiety Scale, Mark & Mathews Scale, Leyton scale, and Pilowski scale) in a sample of 64 alcohol dependent patients, at baseline and after a detoxification treatment. Moreover, we recruited 47 non-consanguineous relatives who did not suffer alcohol related disorders and underwent the same tests. In both groups we genotyped 11 genetic variations (rs1800587; rs3087258; rs1799724; 5-HTTLPR; rs1386493; rs1386494; rs1487275; rs1843809; rs4570625; rs2129575; rs6313) located in genes whose impact on alcohol related behaviors and disorders has been hypothesized (IL1A, IL1B, TNF, 5-HTTLPR, TPH2 and HTR2A). We analyzed the epistasis of these genetic variations upon the biological and psychological dimensions in the cases and their relatives. Further on, we analyzed the effects of the combined genetic variations on the short - term detoxification treatment efficacy. Finally, being the only not yet investigated variation within this sample, we analyzed the impact of the rs6313 alone on baseline assessment and treatment efficacy. We detected the following results: the couple rs6313 + rs2129575 affected the Leyton -Trait at admission (p = 0.01) (obsessive-compulsive trait), whilst rs1800587 + 5-HTTLPR impacted the Pilowski test at admission (p = 0.01) (hypochondriac symptoms). These results did not survive Bonferroni correction (p < or = 0.004). This lack of association may depend on the incomplete gene coverage or on the small sample size which limited the power of the study. On the other hand, it may reflect a substantial absence of relevance of the genotype variants toward the alcohol related investigated dimensions. Nonetheless, the marginal significance we detected could witness an informative correlation worth investigating in larger samples.

Indexed as

Epistasis, GeneticAdultAlcoholismCase-Control StudiesFemaleGenetic VariationHumansInterleukin-1alphaInterleukin-1betaMaleMiddle AgedPrincipal Component AnalysisPsychometricsReceptor, Serotonin, 5-HT2ASerotonin Plasma Membrane Transport ProteinsTryptophan HydroxylaseIL1A protein, humanIL1B protein, humanInterleukin-1alphaInterleukin-1betaReceptor, Serotonin, 5-HT2ASerotonin Plasma Membrane Transport ProteinsSLC6A4 protein, humanTPH2 protein, humanTryptophan HydroxylaseTumor Necrosis Factor-alpha5HTPRalcohol dependenceassociationgeneHTR2AIL1AIL1BTNFTPH2

Identifiers

PMID19742166
PMCPMC2738893

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.