Evidence map›Paper›PMID 19741685›Full record

ArticleNature2009

Prepublication data sharing.

Toronto International Data Release Workshop Authors, Ewan Birney, Thomas J Hudson, Eric D Green, Chris Gunter, Sean Eddy, Jane Rogers, Jennifer R Harris, S Dusko Ehrlich, Rolf Apweiler and 66 more

Abstract read
In one paragraph

Article in Nature, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 130 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
130citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

130 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Analytical code sharing practices in biomedical research.bioRxiv : the preprint server for biology · 2023
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Bringing Code to Data: Do Not Forget Governance.Journal of medical Internet research · 2020
    Article

70 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

76 authors.

Toronto International Data Release Workshop Authors
Ewan Birney
Thomas J Hudson
Eric D Green
Chris Gunter
Sean Eddy
Jane Rogers
Jennifer R Harris
S Dusko Ehrlich
Rolf Apweiler
Christopher P Austin
Lisa Berglund
Martin Bobrow
Chas Bountra
Anthony J Brookes
Anne Cambon-Thomsen
Nigel P Carter
Rex L Chisholm
Jorge L Contreras
Robert M Cooke
William L Crosby
Ken Dewar
Richard Durbin
Stephanie O M Dyke
Joseph R Ecker
Khaled El Emam
Lars Feuk
Stacey B Gabriel
John Gallacher
William M Gelbart
Antoni Granell
Francisco Guarner
Tim Hubbard
Scott A Jackson
Jennifer L Jennings
Yann Joly
Steven M Jones
Jane Kaye
Karen L Kennedy
Bartha Maria Knoppers
Nikos C Kyrpides
William W Lowrance
Jingchu Luo
John J MacKay
Luis Martín-Rivera
W Richard McCombie
John D McPherson
Linda Miller
Webb Miller
Don Moerman
Vincent Mooser
Cynthia C Morton
James M Ostell
B F Francis Ouellette
Julian Parkhill
Parminder S Raina
Christopher Rawlings
Steven E Scherer
Stephen W Scherer
Paul N Schofield
Christoph W Sensen
Victoria C Stodden
Michael R Sussman
Toshihiro Tanaka
Janet Thornton
Tatsuhiko Tsunoda
David Valle
Eero I Vuorio
Neil M Walker
Susan Wallace
George Weinstock
William B Whitman
Kim C Worley
Cathy Wu
Jiayan Wu
Jun Yu

Funding

National Biomedical Information ServicesZIHLM200888 · NLM · NATIONAL LIBRARY OF MEDICINE · PI PALTOO, DINA · 2009 to 2025
$5200.7M
The Human Genome Sequencing CenterU54HG003273 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI GIBBS, RICHARD A · 2004 to 2015
$341.3M
NIH Chemical Genomics CenterZIBHG200319 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI AUSTIN, CHRISTOPHER P · 2010 to 2011
$55.9M
Biotechnology and Biological Sciences Research CouncilNHGRI NIH HHS U54 HG003273Wellcome Trust 062023Wellcome Trust 077198
6 · The paper itself

Abstract

Rapid release of prepublication data has served the field of genomics well. Attendees at a workshop in Toronto recommend extending the practice to other biological data sets.

Indexed as

Access to InformationGuidelines as TopicPublishingResearchCooperative BehaviorHuman Genome ProjectHumansOntarioResearch Personnel

Identifiers

PMID19741685
PMCPMC3073843

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.