Evidence map›Paper›PMID 19741252›Full record

ArticleMolecular & cellular proteomics : MCP2009

In vitro and in vivo protein-bound tyrosine nitration characterized by diagonal chromatography.

Bart Ghesquière, Niklaas Colaert, Kenny Helsens, Lien Dejager, Caroline Vanhaute, Katleen Verleysen, Koen Kas, Evy Timmerman, Marc Goethals, Claude Libert and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 92 citations in OpenAlex.

  1. Nitration in cancer signaling.Redox biology · 2026
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  5. Switchable Nitroproteome States ofFrontiers in microbiology · 2019
    Article
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  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Bart GhesquièreDepartment of Medical Protein Research, VIB, B-9000 Ghent, Belgium.
Niklaas Colaert
Kenny Helsens
Lien Dejager
Caroline Vanhaute
Katleen Verleysen
Koen Kas
Evy Timmerman
Marc Goethals
Claude Libert
Joël Vandekerckhove
Kris Gevaert
Ghent University · BEVIB-UGent Center for Medical Biotechnology · BEVlaams Instituut voor Biotechnologie · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A new proteomics technique for analyzing 3-nitrotyrosine-containing peptides is presented here. This technique is based on the combined fractional diagonal chromatography peptide isolation procedures by which specific classes of peptides are isolated following a series of identical reverse-phase HPLC separation steps. Here dithionite is used to reduce 3-nitrotyrosine to 3-aminotyrosine peptides, which thereby become more hydrophilic. Our combined fractional diagonal chromatography technique was first applied to characterize tyrosine nitration in tetranitromethane-modified BSA and further led to a high quality list of 335 tyrosine nitration sites in 267 proteins in a peroxynitrite-treated lysate of human Jurkat cells. We then analyzed a serum sample of a C57BL6/J mouse in which septic shock was induced by intravenous Salmonella infection and identified six in vivo nitration events in four serum proteins, thereby illustrating that our technique is sufficiently sensitive to identify rare in vivo tyrosine nitration sites in a very complex background.

Indexed as

Amino Acid SequenceAnimalsBlood ProteinsCattleCell ExtractsChromatography, High Pressure LiquidChromatography, Reverse-PhaseDisease Models, AnimalHumansJurkat CellsMiceMice, Inbred C57BLMolecular Sequence DataOxidation-ReductionPeptidesProteome3-nitrotyrosineBlood ProteinsCell ExtractsPeptidesProteomeSerum Albumin, Bovinesodium thiosulfateTetranitromethaneThiosulfatesTyrosine

Identifiers

PMID19741252
PMCPMC2816017
OpenAlexW2132039382

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.