Evidence map›Paper›PMID 19740736›Full record

ArticleThe Journal of biological chemistry2009

Distinct amino termini of two human HCS isoforms influence biotin acceptor substrate recognition.

Maria Ingaramo, Dorothy Beckett

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. A conserved regulatory mechanism in bifunctional biotin protein ligases.Protein science : a publication of the Protein Society · 2017
    Article
  6. Article
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Maria IngaramoDepartment of Chemistry and Biochemistry, Center for Biological Structure and Organization, University of Maryland, College Park, Maryland 20742, USA.
Dorothy Beckett
University of Maryland, College Park · US

Funding

QUANTITATIVE STUDIES OF THE BIOTIN REGULATORY SYSTEMR01GM046511 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI BECKETT, DOROTHY · 1997 to 2010
$2.7M
Purchase of a Beckman XL-1 Analytical UltracentrifugeS10RR015899 · NCRR · UNIVERSITY OF MARYLAND COLLEGE PK CAMPUS · PI BECKETT, DOROTHY · 2002 to 2002
$215k
NCRR NIH HHS S10-RR15899NIGMS NIH HHS R01 GM046511NIGMS NIH HHS R01-GM46511
6 · The paper itself

Abstract

The human holocarboxylase synthetase (HCS) catalyzes transfer of biotin to biotin-dependent carboxylases, and the enzyme is therefore of fundamental importance for many physiological processes, including fatty acid synthesis, gluconeogenesis, and amino acid catabolism. In addition, the enzyme functions in regulating transcription initiation at several genes that code for proteins involved in biotin metabolism. Two major forms of HCS exist in humans, which differ at the amino terminus by 57 amino acids. In this work, the two proteins were expressed in Escherichia coli, purified, and subjected to biochemical characterization. Equilibrium sedimentation indicates that the two proteins are monomers both in their apo-forms and when bound to the enzymatic intermediate biotinyl 5'-AMP. Steady state kinetic analyses as a function of biotin, ATP, or a minimal biotin-accepting substrate concentration indicate similar behaviors for both isoforms. However, pre-steady state analysis of biotin transfer reveals that the full-length HCS associates with the minimal biotin acceptor substrate with a rate twice as fast as that of the truncated isoform. These results are consistent with a role for the HCS amino terminus in biotin acceptor substrate recognition.

Indexed as

Amino Acid MotifsBiotinCarbon-Nitrogen LigasesCatalysisHumansKineticsMethylmalonyl-CoA DecarboxylaseProtein BindingProtein IsoformsRecombinant ProteinsBiotinCarbon-Nitrogen Ligasesholocarboxylase synthetasesMethylmalonyl-CoA DecarboxylaseProtein IsoformsRecombinant Proteins

Identifiers

PMID19740736
PMCPMC2781485
OpenAlexW2043270086

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.