Evidence map›Paper›PMID 19738627›Full record

ReviewNature reviews. Molecular cell biology2009

Systems biology of stem cell fate and cellular reprogramming.

Ben D Macarthur, Avi Ma'ayan, Ihor R Lemischka

Abstract readReview
In one paragraph

Review in Nature reviews. Molecular cell biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 184 papers.

0numbers the graph read from it
0cells of the map it votes in
184citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

184 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Identifying Combinatorial Regulatory Genes for Cell Fate Decision via Reparameterizable Subset Explanations.KDD : proceedings. International Conference on Knowledge Discovery & Data Mining · 2025
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Emergent Criticality in Coupled Boolean Networks.Entropy (Basel, Switzerland) · 2023
    Article
  20. Article

124 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ben D MacarthurDepartment of Gene and Cell Medicine and Black Family Stem Cell Institute, Mount Sinai School of Medicine, New York, New York 10029, USA. ben.macarthur@mssm.edu
Avi Ma'ayan
Ihor R Lemischka

Funding

System Biology Center in New YorkP50GM071558 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KRULWICH, TERRY ANN · 2007 to 2017
$22.8M
STEM CELL GENES IN LEUKEMIA PATHOGENESISP01DK055820 · NIDDK · UNIVERSITY OF WASHINGTON · PI STAMATOYANNOPOULOS, GEORGE · 2000 to 2004
$5.4M
MOLECULAR STUDIES OF HEMATOPOIETIC STEM CELLSR37DK042989 · NIDDK · PRINCETON UNIVERSITY · PI LEMISCHKA, IHOR R · 2000 to 2009
$3.8M
Global & Systems Level Analyses of Cell Fate RegulationR01GM078465 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI LEMISCHKA, IHOR R · 2007 to 2015
$3.7M
Global Genomic Analyses of Human HematopoiesisU01DK063481 · NIDDK · PRINCETON UNIVERSITY · PI LEMISCHKA, IHOR R · 2002 to 2004
$3.2M
ANALYSES OF STEM CELL PLASTICITYR01DK061845 · NIDDK · PRINCETON UNIVERSITY · PI LEMISCHKA, IHOR R · 2001 to 2004
$1.6M
Pursuing PluripotencyRC1GM091176 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI LEMISCHKA, IHOR R · 2010 to 2010
$1000k
CHARACTERIZATION OF HUMAN HEMATOPOIETIC STEM CELLSR01DK054493 · NIDDK · PRINCETON UNIVERSITY · PI LEMISCHKA, IHOR R · 1998 to 2001
$538k
MOLECULAR STUDIES OF HEMATOPOIETIC STEM CELLSR01DK042989 · NIDDK · PRINCETON UNIVERSITY · PI LEMISCHKA, IHOR R · 1990 to 1998
–
NIDDK NIH HHS P01 DK055820NIDDK NIH HHS R01 DK042989NIDDK NIH HHS R01 DK054493NIDDK NIH HHS R01 DK061845NIDDK NIH HHS R37 DK042989NIDDK NIH HHS U01 DK063481NIGMS NIH HHS P50 GM071558NIGMS NIH HHS R01 GM078465NIGMS NIH HHS RC1 GM091176
6 · The paper itself

Abstract

Stem cell differentiation and the maintenance of self-renewal are intrinsically complex processes requiring the coordinated dynamic expression of hundreds of genes and proteins in precise response to external signalling cues. Numerous recent reports have used both experimental and computational techniques to dissect this complexity. These reports suggest that the control of cell fate has both deterministic and stochastic elements: complex underlying regulatory networks define stable molecular 'attractor' states towards which individual cells are drawn over time, whereas stochastic fluctuations in gene and protein expression levels drive transitions between coexisting attractors, ensuring robustness at the population level.

Indexed as

Cellular ReprogrammingSystems BiologyAnimalsCell DifferentiationComputational BiologyGene Expression Regulation, DevelopmentalGene Regulatory NetworksHumansModels, BiologicalStem CellsStochastic Processes

Identifiers

PMID19738627
PMCPMC2928569

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.