Evidence map›Paper›PMID 19737978›Full record

ArticleThe Plant cell2009

Dynamic plastid redox signals integrate gene expression and metabolism to induce distinct metabolic states in photosynthetic acclimation in Arabidopsis.

Katharina Bräutigam, Lars Dietzel, Tatjana Kleine, Elke Ströher, Dennis Wormuth, Karl-Josef Dietz, Dörte Radke, Markus Wirtz, Rüdiger Hell, Peter Dörmann and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed, 2 pooled it
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 2 syntheses or guidelines pooled it, 185 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. STN7 is not essential for developmental acclimation of Arabidopsis to light intensity.The Plant journal : for cell and molecular biology · 2023
    Article
  9. Hormesis Responses of Photosystem II inInternational journal of molecular sciences · 2023
    Article
  10. Article
  11. Photosynthetic acclimation to changing environments.Biochemical Society transactions · 2023
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Functional Analysis of Starch Metabolism in Plants.Plants (Basel, Switzerland) · 2020
    Article
  20. Review

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 1 country.

Katharina BräutigamLehrstuhl für Pflanzenphysiologie, Institut für Allgemeine Botanik und Pflanzenphysiologie, Friedrich-Schiller-Universität Jena, Jena, Germany.
Lars Dietzel
Tatjana Kleine
Elke Ströher
Dennis Wormuth
Karl-Josef Dietz
Dörte Radke
Markus Wirtz
Rüdiger Hell
Peter Dörmann
Adriano Nunes-Nesi
Nicolas Schauer
Alisdair R Fernie
Sandra N Oliver
Peter Geigenberger
Dario Leister
Thomas Pfannschmidt
Max Planck Institute of Molecular Plant Physiology · DEBielefeld University · DEFriedrich Schiller University Jena · DEHeidelberg University · DELudwig-Maximilians-Universität München · DELeibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. - Hans-Knöll-Institut (HKI) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants possess acclimation responses in which structural reconfigurations adapt the photosynthetic apparatus to fluctuating illumination. Long-term acclimation involves changes in plastid and nuclear gene expression and is controlled by redox signals from photosynthesis. The kinetics of these signals and the adjustments of energetic and metabolic demands to the changes in the photosynthetic apparatus are currently poorly understood. Using a redox signaling system that preferentially excites either photosystem I or II, we measured the time-dependent impact of redox signals on the transcriptome and metabolome of Arabidopsis thaliana. We observed rapid and dynamic changes in nuclear transcript accumulation resulting in differential and specific expression patterns for genes associated with photosynthesis and metabolism. Metabolite pools also exhibited dynamic changes and indicate readjustments between distinct metabolic states depending on the respective illumination. These states reflect reallocation of energy resources in a defined and reversible manner, indicating that structural changes in the photosynthetic apparatus during long-term acclimation are additionally supported at the level of metabolism. We propose that photosynthesis can act as an environmental sensor, producing retrograde redox signals that trigger two parallel adjustment loops that coordinate photosynthesis and metabolism to adapt plant primary productivity to the environment.

Indexed as

Oxidation-ReductionPhotosynthesisSignal TransductionAcclimatizationArabidopsisGene Expression ProfilingGene Expression Regulation, PlantLightMetabolomePlastidsRNA, PlantRNA, Plant

Identifiers

PMID19737978
PMCPMC2768923
OpenAlexW2166593659

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.