Evidence map›Paper›PMID 19736315›Full record

ArticleThe Journal of cell biology2009

Identification of a novel, widespread, and functionally important PCNA-binding motif.

Karin M Gilljam, Emadoldin Feyzi, Per A Aas, Mirta M L Sousa, Rebekka Müller, Cathrine B Vågbø, Tara C Catterall, Nina B Liabakk, Geir Slupphaug, Finn Drabløs and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of cell biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 111 papers.

0numbers the graph read from it
0cells of the map it votes in
111citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

111 citing papers in PubMed, 172 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Cancer-Targeting Applications of Cell-Penetrating Peptides.International journal of molecular sciences · 2024
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. A FRET-Based Assay for the Identification of PCNA Inhibitors.International journal of molecular sciences · 2023
    Article
  16. Article
  17. Article
  18. DNA Alkylation Damage by Nitrosamines and Relevant DNA Repair Pathways.International journal of molecular sciences · 2023
    Review
  19. Article
  20. Article

51 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Karin M GilljamDepartment of Cancer Research and Molecular Medicine, Faculty of Medicine, Norwegian University of Science and Technology, N-7489 Trondheim, Norway.
Emadoldin Feyzi
Per A Aas
Mirta M L Sousa
Rebekka Müller
Cathrine B Vågbø
Tara C Catterall
Nina B Liabakk
Geir Slupphaug
Finn Drabløs
Hans E Krokan
Marit Otterlei
Norwegian University of Science and Technology · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Numerous proteins, many essential for the DNA replication machinery, interact with proliferating cell nuclear antigen (PCNA) through the PCNA-interacting peptide (PIP) sequence called the PIP box. We have previously shown that the oxidative demethylase human AlkB homologue 2 (hABH2) colocalizes with PCNA in replication foci. In this study, we show that hABH2 interacts with a posttranslationally modified PCNA via a novel PCNA-interacting motif, which we term AlkB homologue 2 PCNA-interacting motif (APIM). We identify APIM in >200 other proteins involved in DNA maintenance, transcription, and cell cycle regulation, and verify a functional APIM in five of these. Expression of an APIM peptide increases the cellular sensitivity to several cytostatic agents not accounted for by perturbing only the hABH2-PCNA interaction. Thus, APIM is likely to mediate PCNA binding in many proteins involved in DNA repair and cell cycle control during genotoxic stress.

Indexed as

AlkB Homolog 2, Alpha-Ketoglutarate-Dependent DioxygenaseAmino Acid MotifsAnimalsDioxygenasesDNA RepairDNA Repair EnzymesDNA Topoisomerases, Type IIFluorescence Resonance Energy TransferHeLa CellsHumansMolecular Sequence DataPoint MutationProliferating Cell Nuclear AntigenRecombinant Fusion ProteinsSequence AlignmentTranscription Factors, TFIIALKBH2 protein, humanAlkB Homolog 2, Alpha-Ketoglutarate-Dependent DioxygenaseDioxygenasesDNA Repair EnzymesDNA Topoisomerases, Type IIProliferating Cell Nuclear AntigenRecombinant Fusion ProteinsTranscription Factors, TFII

Identifiers

PMID19736315
PMCPMC2742182
OpenAlexW2068605146

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.