Evidence map›Paper›PMID 1973527›Full record

ArticleMolecular and cellular biology1990

A DNA signal from the Thy-1 gene defines de novo methylation patterns in embryonic stem cells.

M Szyf, G Tanigawa, P L McCarthy

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1990. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 75 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. DNA methylation is a reversible biological signal.Proceedings of the National Academy of Sciences of the United States of America · 1999
    Article
  5. Consistent, persistent expression from modified retroviral vectors in murine hematopoietic stem cells.Proceedings of the National Academy of Sciences of the United States of America · 1998
    Article
  6. Inhibition of tumorigenesis by a cytosine-DNA, methyltransferase, antisense oligodeoxynucleotide.Proceedings of the National Academy of Sciences of the United States of America · 1997
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Methylation changes in the apolipoprotein AI gene during embryonic development of the mouse.Proceedings of the National Academy of Sciences of the United States of America · 1991
    Article
  14. Review
  15. DNA methylation and gene expression.Microbiological reviews · 1991
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

M SzyfDepartment of Genetics, Howard Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts.
G Tanigawa
P L McCarthy
Harvard University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although DNA can be extensively methylated de novo when introduced into pluripotent cells, the CpG island in the Thy-1 gene does not become methylated either in the mouse embryo or in embryonic stem cells. A 214-base-pair region near the promoter of the Thy-1 gene protects itself as well as heterologous DNA sequences from de novo methylation. We propose that this nucleotide sequence is representative of a class of important signals that limits de novo methylation in the embryo and establishes the pattern of hypomethylated CpG dinucleotides found in somatic tissues.

Indexed as

GenesAnimalsAntigens, SurfaceBase SequenceCells, CulturedDNAEmbryo, MammalianMethylationMiceMolecular Sequence DataPlasmidsRestriction MappingThy-1 AntigensTransfectionAntigens, SurfaceDNAThy-1 Antigens

Identifiers

PMID1973527
PMCPMC360998
OpenAlexW1832209337

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.