Evidence map›Paper›PMID 19735123›Full record

ArticleACS chemical biology2009

Bivalent peptidomimetic ligands of TrkC are biased agonists and selectively induce neuritogenesis or potentiate neurotrophin-3 trophic signals.

Dianjun Chen, Fouad Brahimi, Yu Angell, Yu-Chin Li, Jennifer Moscowicz, H Uri Saragovi, Kevin Burgess

Open access · greenAbstract read
In one paragraph

Article in ACS chemical biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.4field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 55 citations in OpenAlex.

  1. Review
  2. Selective Modulation of Trk Receptors byACS chemical neuroscience · 2025
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  7. A Photosensitized Singlet Oxygen (Molecules (Basel, Switzerland) · 2022
    Review
  8. Ligand bias in receptor tyrosine kinase signaling.The Journal of biological chemistry · 2020
    Review
  9. TrkC-Targeted Kinase Inhibitors And PROTACs.Molecular pharmaceutics · 2019
    Article
  10. Article
  11. Review
  12. 1,4-Disubstituted 1Frontiers in chemistry · 2019
    Article
  13. Review
  14. Click-Addressable Cassette for Photoaffinity Labeling.ACS medicinal chemistry letters · 2018
    Article
  15. Article
  16. Novel Small Molecule Probes for Metastatic Melanoma.ACS medicinal chemistry letters · 2017
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Dianjun ChenDepartment of Chemistry, Texas A & M University, Box 30012, College Station, Texas 77841.
Fouad Brahimi
Yu Angell
Yu-Chin Li
Jennifer Moscowicz
H Uri Saragovi
Kevin Burgess
Texas A&M University · USJewish General Hospital · CAMcGill University · CA

Funding

Design and Synthesis of Functional NGF PeptidomimeticsR01MH070040 · NIMH · TEXAS A&M UNIVERSITY SYSTEM · PI BURGESS, KEVIN · 2005 to 2009
$1.9M
Evolving Libraries of Bivalent Compounds (RMI)P41GM076261 · NIGMS · TEXAS A&M UNIVERSITY SYSTEM · PI BURGESS, KEVIN · 2005 to 2007
$1.0M
NIGMS NIH HHS GM076261NIGMS NIH HHS P41 GM076261NIMH NIH HHS MH070040NIMH NIH HHS R01 MH070040
6 · The paper itself

Abstract

This study was initiated to find small molecule ligands that would induce a functional response when docked with neurotrophin Trk receptors. "Minimalist" mimics of beta-turns were designed for this purpose. These mimics are (i) rigid, yet easily folded into turn-like conformations, and (ii) readily accessible from amino acids bearing most of the natural side chains. Gram quantities of 16 of these turn mimics were prepared and then assembled into 152 fluorescein-labeled bivalent peptidomimetics via a solution-phase combinatorial method. Fluorescence-based screening of these molecules using cells transfected with the Trk receptors identified 10 potential ligands of TrkC, the receptor for neurotrophin-3. Analogues of these bivalent peptidomimetics with biotin replacing the fluorescein label were then prepared and tested to confirm that binding was not due to the fluorescein. Several assays were conducted to find the mode of action of these biotinylated compounds. Thus, direct binding, survival and neuritogenic, and biochemical signal transduction assays showed 8 of the original 10 hits were agonistic ligands binding to the ectodomain of TrkC. Remarkably, some peptidomimetics afford discrete signals leading to either cell survival or neuritogenic differentiation. The significance of this work is three-fold. First, we succeeded in finding small, selective, proteolytically stable ligands for the TrkC receptor; there are very few of these in the literature. Second, we show that it is possible to activate distinct and biased signaling pathways with ligands binding at the ectodomain of wild-type receptors. Third, the discovery that some peptidomimetics initiate different modes of cell signaling increases their potential as pharmacological probes and therapeutic leads.

Indexed as

AnimalsBiomimeticsCell SurvivalLigandsMiceNeurogenesisNeurotrophin 3NIH 3T3 CellsProtein BindingReceptor, trkCSignal TransductionSmall Molecule LibrariesTransfectionLigandsNeurotrophin 3Receptor, trkCSmall Molecule Libraries

Identifiers

PMID19735123
PMCPMC2756187
OpenAlexW2051793716

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.