Evidence map›Paper›PMID 19734435›Full record

ArticleThe Plant cell2009

Medicago N2-fixing symbiosomes acquire the endocytic identity marker Rab7 but delay the acquisition of vacuolar identity.

Erik Limpens, Sergey Ivanov, Wilma van Esse, Guido Voets, Elena Fedorova, Ton Bisseling

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 155 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Morphology ofPlants (Basel, Switzerland) · 2025
    Article
  5. Review
  6. Article
  7. Review
  8. Autophagy and Symbiosis: Membranes, ER, and Speculations.International journal of molecular sciences · 2024
    Review
  9. Comparison of the Formation of Plant-Microbial Interface inInternational journal of molecular sciences · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Erik LimpensGraduate School of Experimental Plant Sciences, Wageningen University, Wageningen, The Netherlands.
Sergey Ivanov
Wilma van Esse
Guido Voets
Elena Fedorova
Ton Bisseling
Graduate School Experimental Plant Sciences · NLTimiryazev Institute of Plant Physiology · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rhizobium bacteria form N(2)-fixing organelles, called symbiosomes, inside the cells of legume root nodules. The bacteria are generally thought to enter the cells via an endocytosis-like process. To examine this, we studied the identity of symbiosomes in relation to the endocytic pathway. We show that in Medicago truncatula, the small GTPases Rab5 and Rab7 are endosomal membrane identity markers, marking different (partly overlapping) endosome populations. Although symbiosome formation is considered to be an endocytosis-like process, symbiosomes do not acquire Rab5 at any stage during their development, nor do they accept the trans-Golgi network identity marker SYP4, presumed to mark early endosomes in plants. By contrast, the endosomal marker Rab7 does occur on symbiosomes from an early stage of development when they have stopped dividing up to the senescence stage. However, the symbiosomes do not acquire vacuolar SNAREs (SYP22 and VTI11) until the onset of their senescence. By contrast, symbiosomes acquire the plasma membrane SNARE SYP132 from the start of symbiosome formation throughout their development. Therefore, symbiosomes appear to be locked in a unique SYP132- and Rab7-positive endosome stage and the delay in acquiring (lytic) vacuolar identity (e.g., vacuolar SNAREs) most likely ensures their survival and maintenance as individual units.

Indexed as

EndosomesGene Expression Regulation, PlantMedicago truncatulaPhylogenyPlant ProteinsPlants, Genetically Modifiedrab GTP-Binding ProteinsRhizobiumRNA, PlantRoot Nodules, PlantSNARE ProteinsSymbiosisVacuolesPlant Proteinsrab GTP-Binding ProteinsRNA, PlantSNARE Proteins

Identifiers

PMID19734435
PMCPMC2768938
OpenAlexW2104809061

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.