Evidence map›Paper›PMID 19730690›Full record

ArticlePLoS pathogens2009

A Novel extracytoplasmic function (ECF) sigma factor regulates virulence in Pseudomonas aeruginosa.

María A Llamas, Astrid van der Sar, Byron C H Chu, Marion Sparrius, Hans J Vogel, Wilbert Bitter

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 84 citations in OpenAlex.

  1. Review
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  6. Evaluating the In Vivo Virulence of EnvironmentalAntibiotics (Basel, Switzerland) · 2023
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  7. Transcriptional Regulators Controlling Virulence inInternational journal of molecular sciences · 2023
    Review
  8. Article
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  14. Specific and Global RNA Regulators inInternational journal of molecular sciences · 2021
    Review
  15. Tracking the transition to agriculture in Southern Europe through ancient DNA analysis of dental calculus.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Zebrafish Embryo Infection Model to InvestigateFrontiers in cellular and infection microbiology · 2021
    Review
  17. Article
  18. RegulomePA: a database of transcriptional regulatory interactions in Pseudomonas aeruginosa PAO1.Database : the journal of biological databases and curation · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

María A LlamasDepartment of Medical Microbiology, VU University Medical Center, Amsterdam, The Netherlands. m.llamas@vumc.nl
Astrid van der Sar
Byron C H Chu
Marion Sparrius
Hans J Vogel
Wilbert Bitter
Amsterdam UMC Location VUmc · NLUniversity of Calgary · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Next to the two-component and quorum sensing systems, cell-surface signaling (CSS) has been recently identified as an important regulatory system in Pseudomonas aeruginosa. CSS systems sense signals from outside the cell and transmit them into the cytoplasm. They generally consist of a TonB-dependent outer membrane receptor, a sigma factor regulator (or anti-sigma factor) in the cytoplasmic membrane, and an extracytoplasmic function (ECF) sigma factor. Upon perception of the extracellular signal by the receptor the ECF sigma factor is activated and promotes the transcription of a specific set of gene(s). Although most P. aeruginosa CSS systems are involved in the regulation of iron uptake, we have identified a novel system involved in the regulation of virulence. This CSS system, which has been designated PUMA3, has a number of unusual characteristics. The most obvious difference is the receptor component which is considerably smaller than that of other CSS outer membrane receptors and lacks a beta-barrel domain. Homology modeling of PA0674 shows that this receptor is predicted to be a bilobal protein, with an N-terminal domain that resembles the N-terminal periplasmic signaling domain of CSS receptors, and a C-terminal domain that resembles the periplasmic C-terminal domains of the TolA/TonB proteins. Furthermore, the sigma factor regulator both inhibits the function of the ECF sigma factor and is required for its activity. By microarray analysis we show that PUMA3 regulates the expression of a number of genes encoding potential virulence factors, including a two-partner secretion (TPS) system. Using zebrafish (Danio rerio) embryos as a host we have demonstrated that the P. aeruginosa PUMA3-induced strain is more virulent than the wild-type. PUMA3 represents the first CSS system dedicated to the transcriptional activation of virulence functions in a human pathogen.

Indexed as

AnimalsAntibodies, BacterialBacterial ProteinsHumansImmunohistochemistryKaplan-Meier EstimateMicroscopy, FluorescenceModels, GeneticModels, MolecularOligonucleotide Array Sequence AnalysisOligopeptidesProtein StabilityPseudomonas aeruginosaReproducibility of ResultsSigma FactorVirulence FactorsAntibodies, BacterialBacterial ProteinsOligopeptidespyoverdinSigma FactorVirulence Factors

Identifiers

PMID19730690
PMCPMC2729926
OpenAlexW1978334623

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.