Evidence map›Paper›PMID 19729843›Full record

ReviewThe Journal of clinical investigation2009

A decade of molecular pathogenomic analysis of group A Streptococcus.

James M Musser, Samuel A Shelburne

Registry-linked trialOpen access · bronzeAbstract readReview
In one paragraph

Review in The Journal of clinical investigation, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01558804 (Gene Expression in Isolates of Group A Streptococci Recovered From Patients Who Are Carriers), which is not on this map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
9.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01558804 recruitingnot on this mapstarted 2011, after this paper: background citation

Gene Expression in Isolates of Group A Streptococci Recovered From Patients Who Are Carriers

TypeobservationalSponsorUniversity of Wisconsin, MadisonRan2011 to 2028Enrolled180ConditionsStreptococcal PharyngitisArmsIdentifying group A strep carriers
3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 87 citations in OpenAlex.

  1. Molecular & cellular proteomics : MCP · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

James M MusserCenter for Molecular and Translational Human Infectious Diseases Research, The Methodist Hospital Research Institute, Houston, Texas 77030, USA. jmmusser@tmhs.org
Samuel A Shelburne
Houston Methodist · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Molecular pathogenomic analysis of the human bacterial pathogen group A Streptococcus has been conducted for a decade. Much has been learned as a consequence of the confluence of low-cost DNA sequencing, microarray technology, high-throughput proteomics, and enhanced bioinformatics. These technical advances, coupled with the availability of unique bacterial strain collections, have facilitated a systems biology investigative strategy designed to enhance and accelerate our understanding of disease processes. Here, we provide examples of the progress made by exploiting an integrated genome-wide research platform to gain new insight into molecular pathogenesis. The studies have provided many new avenues for basic and translational research.

Indexed as

Gene Transfer, HorizontalGenome, BacterialGenome-Wide Association StudyGenomicsHost-Pathogen InteractionsHumansMolecular EpidemiologyStreptococcal InfectionsStreptococcal VaccinesStreptococcus pyogenesSystems BiologyVirulenceVirulence FactorsStreptococcal VaccinesVirulence Factors

Identifiers

PMID19729843
PMCPMC2735924
OpenAlexW2080207956

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.