Evidence map›Paper›PMID 19729513›Full record

ArticleNucleic acids research2009

Herpesvirus protein ICP27 switches PML isoform by altering mRNA splicing.

Takayuki Nojima, Takako Oshiro-Ideue, Hiroto Nakanoya, Hidenobu Kawamura, Tomomi Morimoto, Yasushi Kawaguchi, Naoyuki Kataoka, Masatoshi Hagiwara

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  6. mRNA Splicing ofViruses · 2024
    Article
  7. Review
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  16. Review
  17. Article
  18. Herpes simplex virus ICP27 regulates alternative pre-mRNA polyadenylation and splicing in a sequence-dependent manner.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Takayuki NojimaDepartment of Functional Genomics, Laboratory of Gene Expression, School of Biomedical Science, Tokyo Medical and Dental University, Tokyo.
Takako Oshiro-Ideue
Hiroto Nakanoya
Hidenobu Kawamura
Tomomi Morimoto
Yasushi Kawaguchi
Naoyuki Kataoka
Masatoshi Hagiwara
Tokyo Medical and Dental University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Viruses use alternative splicing to produce a broad series of proteins from small genomes by utilizing the cellular splicing machinery. Since viruses use cellular RNA binding proteins for viral RNA processing, it is presumable that the splicing of cellular pre-mRNAs is affected by viral infection. Here, we showed that herpes simplex virus type 2 (HSV-2) modifies the expression of promyelocytic leukemia (PML) isoforms by altering pre-mRNA splicing. Using a newly developed virus-sensitive splicing reporter, we identified the viral protein ICP27 as an alternative splicing regulator of PML isoforms. ICP27 was found to bind preferentially to PML pre-mRNA and directly inhibit the removal of PML intron 7a in vitro. Moreover, we demonstrated that ICP27 functions as a splicing silencer at the 3' splice site of the PML intron 7a. The switching of PML isoform from PML-II to PML-V as induced by ICP27 affected HSV-2 replication, suggesting that the viral protein modulates the splicing code of cellular pre-mRNA(s) governing virus propagation.

Indexed as

RNA SplicingCell LineGenes, ReporterHerpesvirus 2, HumanHumansIntronsNuclear ProteinsPromyelocytic Leukemia ProteinProtein IsoformsProtein Structure, TertiaryRNARNA PrecursorsRNA Splice SitesTranscription FactorsTumor Suppressor ProteinsViral ProteinsNuclear ProteinsPML protein, humanPromyelocytic Leukemia ProteinProtein IsoformsRNARNA PrecursorsRNA Splice SitesTranscription FactorsTumor Suppressor ProteinsViral Proteins

Identifiers

PMID19729513
PMCPMC2770646
OpenAlexW2119904830

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.