Evidence map›Paper›PMID 19728146›Full record

ArticleMolecular biology reports2010

The complete mitogenome and phylogenetic analysis of Bombyx mandarina strain Qingzhou.

Xiao-long Hu, Guang-li Cao, Ren-yu Xue, Xiao-jian Zheng, Xing Zhang, Hai-rong Duan, Cheng-liang Gong

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Article in Molecular biology reports, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

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0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Complete mitochondrial genome of the highly fecundMitochondrial DNA. Part B, Resources · 2021
    Article
  3. Complete mitochondrial genome of the silkworm strain, ChilseongjamMitochondrial DNA. Part B, Resources · 2019
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Xiao-long HuMedical College of Soochow University, 215123 Suzhou, China.
Guang-li Cao
Ren-yu Xue
Xiao-jian Zheng
Xing Zhang
Hai-rong Duan
Cheng-liang Gong

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The complete nucleotide sequence of the mitogenome of Bombyx mandarina strain Qingzhou was determined. The circular genome is 15,717 bp long and has the typical gene organization and order of lepidopteran mitogenomes. All protein-coding sequences are initiated with a typical ATN codon, except the COI gene, which has a 4-bp TTAG putative initiator codon. Eleven of the 13 protein-coding gene have a complete termination codon (all TAA), but the remaining two genes terminate with incomplete codons. All transfer RNAs (tRNAs) have a clover-leaf structure typical of the mitochondrial tRNAs, and some of them have a mismatch in the four-stem-and-loop structure. The length of the A + T rich region of B. mandarina strain Qingzhou is 495 bp, shorter than that of B. mandarina strain Tsukuba (747 bp) but similar to that of Bombyx mori. Phylogenetic analysis based on the whole mitochondrial genome sequences of the available sequenced species (B. mori strains C-108, Aojuku, Backokjam, and Xiafang, B. mandarina strains Tsukuba, Ankang, and Qingzhou, and Antheraea pernyi) shows the origin of the domesticated silkmoth B. mori to be the Chinese B. mandarina. Nuclear mitochondrial pseudogene sequences were detected in the nuclear genome of B. mori with the MEGA BLAST search program. A phylogenetic analysis of these nuclear mitochondrial pseudogene sequences suggests that B. mori was domesticated independently in different areas and periods.

Indexed as

PhylogenyAnimalsAT Rich SequenceBase SequenceBombyxCell NucleusDNA, MitochondrialEvolution, MolecularGenes, InsectGenome, MitochondrialMolecular Sequence DataOpen Reading FramesPseudogenesRNA, RibosomalRNA, TransferSilkDNA, MitochondrialRNA, RibosomalRNA, TransferSilk

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.