Evidence map›Paper›PMID 19727824›Full record

ArticleMolecular genetics and genomics : MGG2009

New mutant versions of yeast FACT subunit Spt16 affect cell integrity.

Allyson F O'Donnell, Jennifer R Stevens, Rosemarie Kepkay, Christine A Barnes, Gerald C Johnston, Richard A Singer

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular genetics and genomics : MGG, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Allyson F O'DonnellDepartment of Biochemistry and Molecular Biology, Dalhousie University, Sir Charles Tupper Medical Building, 5850 College Street, Halifax, NS, B3H 1X5, Canada.
Jennifer R Stevens
Rosemarie Kepkay
Christine A Barnes
Gerald C Johnston
Richard A Singer
Dalhousie University · CA

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

Transcription by RNA polymerase II is impeded by the nucleosomal organization of DNA; these negative effects are modulated at several stages of nucleosomal DNA transcription by FACT, a heterodimeric transcription factor. At promoters, FACT facilitates the binding of TATA-binding factor, while during transcription elongation FACT mediates the necessary destabilization of nucleosomes and subsequent restoration of nucleosome structure in the wake of the transcription elongation complex. Altered FACT activity can impair the fidelity of transcription initiation and affect transcription patterns. Using reporter genes we have identified new mutant versions of the Spt16 subunit of yeast FACT with dominant negative effects on the fidelity of transcription initiation. Two of these spt16 mutant alleles also affect cell integrity. Cells relying on these spt16 mutant alleles display sorbitol-remediated temperature sensitivity, altered sensitivity to detergent, and abnormal morphologies, and are further inhibited by the ssd1-d mutation. The overexpression of components of protein kinase C (Pkc1) signaling diminishes this spt16 ssd1-d temperature sensitivity, whereas gene deletions eliminating components of Pkc1 signaling further impair these spt16 mutant cells. Thus, the FACT subunit Spt16 and Pkc1 signaling have an overlapping essential function, with an unexpected role for FACT in the maintenance of cell integrity.

Indexed as

Allelesbeta-GalactosidaseCell WallGene Expression Regulation, FungalGenes, DominantGenes, FungalGenes, ReporterGenetic Complementation TestHydroxyureaMutationPhenotypeProtein Kinase CProtein SubunitsRNA, MessengerSaccharomyces cerevisiaeSaccharomyces cerevisiae Proteinsbeta-GalactosidaseHydroxyureaPKC1 protein, S cerevisiaeProtein Kinase CProtein SubunitsRNA, MessengerSaccharomyces cerevisiae ProteinsSPT16 protein, S cerevisiaeTranscriptional Elongation Factors

Identifiers

PMID19727824
OpenAlexW1990020455

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.