Evidence map›Paper›PMID 19726508›Full record

ArticleJournal of virology2009

Simian immunodeficiency virus SIVagm from African green monkeys does not antagonize endogenous levels of African green monkey tetherin/BST-2.

Efrem S Lim, Michael Emerman

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
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  5. Review
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  8. Review
  9. Article
  10. Article
  11. Article
  12. Vpu and BST2: Still Not There Yet?Frontiers in microbiology · 2012
    Article
  13. Article
  14. Retroviral restriction and dependency factors in primates and carnivores.Veterinary immunology and immunopathology · 2011
    Review
  15. Article
  16. Article
  17. Article
  18. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Efrem S LimDepartment of Microbiology, University of Washington, Seattle, Washington, USA.
Michael Emerman
Fred Hutch Cancer Center · US

Funding

ROLE OF VARIOUS HIV-1 GENES IN PATHOGENESISR55AI030937 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GUPTA, PHALGUNI · 1991 to 1991
–
NIAID NIH HHS R37 AI30937
6 · The paper itself

Abstract

The Vpu accessory gene that originated in the primate lentiviral lineage leading to human immunodeficiency virus type 1 is an antagonist of human tetherin/BST-2 restriction. Most other primate lentivirus lineages, including the lineage represented by simian immunodeficiency virus SIVagm from African green monkeys (AGMs), do not encode Vpu. While some primate lineages encode gene products other than Vpu that overcome tetherin/BST-2, we find that SIVagm does not antagonize physiologically relevant levels of AGM tetherin/BST-2. AGM tetherin/BST-2 can be induced by low levels of type I interferon and can potently restrict two independent strains of SIVagm. Although SIVagm Nef had an effect at low levels of AGM tetherin/BST-2, simian immunodeficiency virus SIVmus Vpu, from a virus that infects the related monkey Cercopithecus cephus, is able to antagonize even at high levels of AGM tetherin/BST-2 restriction. We propose that since the replication of SIVagm does not induce interferon production in vivo, tetherin/BST-2 is not induced, and therefore, SIVagm does not need Vpu. This suggests that primate lentiviruses evolve tetherin antagonists such as Vpu or Nef only if they encounter tetherin during the typical course of natural infection.

Indexed as

AnimalsBlotting, WesternCell LineChlorocebus aethiopsGene Products, nefInterferon-alphaInterferon alpha-2Interferon-betaInterferon beta-1bMolecular Sequence DataRecombinant ProteinsRetroviridae ProteinsReverse Transcriptase Polymerase Chain ReactionSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusViral Regulatory and Accessory ProteinsGene Products, nefInterferon-alphaInterferon alpha-2Interferon-betaInterferon beta-1bRecombinant ProteinsRetroviridae ProteinsViral Regulatory and Accessory Proteins

Identifiers

PMID19726508
PMCPMC2772663
OpenAlexW2132629055

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.