Evidence map›Paper›PMID 19723342›Full record

ArticleProteome science2009

Subcellular proteomic characterization of the high-temperature stress response of the cyanobacterium Spirulina platensis.

Apiradee Hongsthong, Matura Sirijuntarut, Rayakorn Yutthanasirikul, Jittisak Senachak, Pavinee Kurdrid, Supapon Cheevadhanarak, Morakot Tanticharoen

Open access · goldAbstract read
In one paragraph

Article in Proteome science, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.2field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 46 citations in OpenAlex.

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  6. Cells · 2020
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  18. Systems biology and metabolic engineering of Arthrospira cell factories.Computational and structural biotechnology journal · 2012
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Apiradee HongsthongNational Center for Genetic Engineering and Biotechnology, Thakham, Bangkhuntien, Bangkok, Thailand. apiradee@biotec.or.th
Matura Sirijuntarut
Rayakorn Yutthanasirikul
Jittisak Senachak
Pavinee Kurdrid
Supapon Cheevadhanarak
Morakot Tanticharoen
National Center for Genetic Engineering and Biotechnology · THKing Mongkut's University of Technology Thonburi · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study examined the changes in protein expression in Spirulina platensis upon exposure to high temperature, with the changes in expression analyzed at the subcellular level. In addition, the transcriptional expression level of some differentially expressed proteins, the expression pattern clustering, and the protein-protein interaction network were analyzed. The results obtained from differential expression analysis revealed up-regulation of proteins involved in two-component response systems, DNA damage and repair systems, molecular chaperones, known stress-related proteins, and proteins involved in other biological processes, such as capsule formation and unsaturated fatty acid biosynthesis. The clustering of all differentially expressed proteins in the three cellular compartments showed: (i) the majority of the proteins in all fractions were sustained tolerance proteins, suggesting the roles of these proteins in the tolerance to high temperature stress, (ii) the level of resistance proteins in the photosynthetic membrane was 2-fold higher than the level in two other fractions, correlating with the rapid inactivation of the photosynthetic system in response to high temperature. Subcellular communication among the three cellular compartments via protein-protein interactions was clearly shown by the PPI network analysis. Furthermore, this analysis also showed a connection between temperature stress and nitrogen and ammonia assimilation.

Identifiers

PMID19723342
PMCPMC2743650
OpenAlexW2100709730

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.