Evidence map›Paper›PMID 19722278›Full record

ArticleProtein science : a publication of the Protein Society2009

Structure of the Cdt1 C-terminal domain: conservation of the winged helix fold in replication licensing factors.

Bulat I Khayrutdinov, Won Jin Bae, Young Mi Yun, Jie Hye Lee, Takashi Tsuyama, Jung Joo Kim, Eunha Hwang, Kyoung-Seok Ryu, Hae-Kap Cheong, Chaejoon Cheong and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
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  5. Article
  6. Review
  7. Article
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  9. Article
  10. Review
  11. Article
  12. Article
  13. Mechanisms and regulation of DNA replication initiation in eukaryotes.Critical reviews in biochemistry and molecular biology · 2017
    Review
  14. The Temporal Regulation of S Phase Proteins During GAdvances in experimental medicine and biology · 2017
    Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Helicase loading at chromosomal origins of replication.Cold Spring Harbor perspectives in biology · 2013
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 3 countries.

Bulat I KhayrutdinovThe Magnetic Resonance Team, Korea Basic Science Institute, 804-1 Yangchung-Ri, Ochang, Chungbuk 363-883, South Korea.
Won Jin Bae
Young Mi Yun
Jie Hye Lee
Takashi Tsuyama
Jung Joo Kim
Eunha Hwang
Kyoung-Seok Ryu
Hae-Kap Cheong
Chaejoon Cheong
Jung-Soon Ko
Takemi Enomoto
P Andrew Karplus
Peter Güntert
Shusuke Tada
Young Ho Jeon
Yunje Cho
Pohang University of Science and Technology · KRKorea Basic Science Institute · KRTohoku University · JPOregon State University · USRIKEN Center for Integrative Medical Sciences · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In eukaryotic replication licensing, Cdt1 plays a key role by recruiting the MCM2-7 complex onto the origin of chromosome. The C-terminal domain of mouse Cdt1 (mCdt1C), the most conserved region in Cdt1, is essential for licensing and directly interacts with the MCM2-7 complex. We have determined the structures of mCdt1CS (mCdt1C_small; residues 452 to 557) and mCdt1CL (mCdt1C_large; residues 420 to 557) using X-ray crystallography and solution NMR spectroscopy, respectively. While the N-terminal 31 residues of mCdt1CL form a flexible loop with a short helix near the middle, the rest of mCdt1C folds into a winged helix structure. Together with the middle domain of mouse Cdt1 (mCdt1M, residues 172-368), this study reveals that Cdt1 is formed with a tandem repeat of the winged helix domain. The winged helix fold is also conserved in other licensing factors including archaeal ORC and Cdc6, which supports an idea that these replication initiators may have evolved from a common ancestor. Based on the structure of mCdt1C, in conjunction with the biochemical analysis, we propose a binding site for the MCM complex within the mCdt1C.

Indexed as

Amino Acid SequenceAnimalsBinding SitesCell Cycle ProteinsConserved SequenceDNA-Binding ProteinsMiceMolecular Sequence DataMutationNuclear Magnetic Resonance, BiomolecularNuclear ProteinsProtein Structure, TertiarySequence AlignmentCell Cycle ProteinsDNA-Binding ProteinsNuclear ProteinsRis2 protein, mouse

Identifiers

PMID19722278
PMCPMC2788280
OpenAlexW2160507400

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.