Evidence map›Paper›PMID 19720962›Full record

ArticleThe Journal of general physiology2009

Proton inhibition of unitary currents of vanilloid receptors.

Beiying Liu, Jing Yao, Yingwei Wang, Hui Li, Feng Qin

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. TRPV1 pore turret dictates distinct DkTx and capsaicin gating.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Proton block of proton-activated TRPV1 current.The Journal of general physiology · 2015
    Article
  12. Article
  13. Article
  14. Article
  15. Calcium-dependent decrease in the single-channel conductance of TRPV1.Pflugers Archiv : European journal of physiology · 2011
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Beiying LiuDepartment of Physiology and Biophysical Sciences, State University of New York at Buffalo, Buffalo, NY 14214, USA.
Jing Yao
Yingwei Wang
Hui Li
Feng Qin
University at Buffalo, State University of New York · USXinHua Hospital · CN

Funding

Mechanisms of Heat Activation and Multimodal Functions of VR1 Receptor ChannelsR01GM065994 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI QIN, FENG · 2002 to 2010
$2.4M
NIGMS NIH HHS R01 GM065994NIGMS NIH HHS R01-GM65994
6 · The paper itself

Abstract

Protons, which are released during inflammation and injury, regulate many receptors and ion channels involved in pain transduction, including capsaicin channels (transient receptor potential vanilloid receptors 1). Whereas extracellular acidification both sensitizes and directly activates the channel, it also causes concomitant reduction of the unitary current amplitudes. Here, we investigate the mechanisms and molecular basis of this inhibitory effect of protons on channel conductance. Single-channel recordings showed that the unitary current amplitudes decreased with extracellular pH in a dose-dependent manner, consistent with a model in which protons bind to a site within the channel with an apparent pKa of approximately 6. The inhibition was voltage dependent, approximately 65% at -60 mV and 37% at +60 mV when pH was reduced from 7.4 to 5.5. The unitary current amplitudes reached saturation at [K+]>or=1 M, and notably the maximum amplitudes did not converge with different pHs, inconsistent with a blockade model based on surface charge screening or competitive inhibition of permeating ions. Mutagenesis experiments uncovered two acidic residues critical for proton inhibition, one located at the pore entrance and the other on the pore helix. Based on homology to the KcsA structure, the two acidic residues, along with another basic residue also on the pore helix, could form a triad interacting with each other through extensive hydrogen bonds and electrostatic contacts, suggesting that protons may mediate the interactions between the selectivity filter and pore helix, thereby altering the local structure in the filter region and consequently the conductance of the channel.

Indexed as

Ion Channel GatingModels, ChemicalProtonsAmino Acid SubstitutionAnimalsCell LineHumansHydrogen-Ion ConcentrationOocytesPatch-Clamp TechniquesRatsTRPV Cation ChannelsXenopus laevisProtonsTrpv1 protein, ratTRPV Cation Channels

Identifiers

PMID19720962
PMCPMC2737227
OpenAlexW2105814739

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.