Evidence map›Paper›PMID 19720021›Full record

ArticleBiophysical journal2009

Single-channel kinetic analysis for activation and desensitization of homomeric 5-HT(3)A receptors.

Jeremías Corradi, Fernanda Gumilar, Cecilia Bouzat

Abstract read
In one paragraph

Article in Biophysical journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Review
  2. Article
  3. Structural basis for partial agonism in 5-HTNature structural & molecular biology · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. DecipheringFrontiers in cellular neuroscience · 2021
    Article
  14. Article
  15. Article
  16. Microsecond-timescale simulations suggest 5-HT-mediated preactivation of the 5-HTProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  17. A New Antagonist ofFrontiers in neuroscience · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jeremías CorradiInstituto de Investigaciones Bioquímicas de Bahía Blanca, Universidad Nacional del Sur/Consejo Nacional de Investigaciones Científicas y Técnicas, Bahía Blanca, Argentina.
Fernanda Gumilar
Cecilia Bouzat

Funding

Allosteric Coupling in Homomeric Cys-loop ReceptorsR01NS053521 · NINDS · MAYO CLINIC ROCHESTER · PI SINE, STEVEN M · 2006 to 2009
$1.3M
NINDS NIH HHS NS053521NINDS NIH HHS R01 NS053521
6 · The paper itself

Abstract

The 5-HT(3)A receptor is a member of the Cys-loop family of ligand-gated ion channels. To perform kinetic analysis, we mutated the 5-HT3A subunit to obtain a high-conductance form so that single-channel currents can be detected. At all 5-HT concentrations (> 0.1 microM), channel activity appears as openings in quick succession that form bursts, which coalesce into clusters. By combining single-channel and macroscopic data, we generated a kinetic model that perfectly describes activation, deactivation, and desensitization. The model shows that full activation arises from receptors with three molecules of agonist bound. It reveals an earlier conformational change of the fully liganded receptor that occurs while the channel is still closed. From this pre-open closed state, the receptor enters into an open-closed cycle involving three open states, which form the cluster whose duration parallels the time constant of desensitization. A similar model lacking the pre-open closed state can describe the data only if the opening rates are fixed to account for the slow activation rate. The application of the model to M4 mutant receptors shows that position 10' contributes to channel opening and closing rates. Thus, our kinetic model provides a foundation for understanding structural bases of activation and drug action.

Indexed as

Models, BiologicalAnimalsCell LineComputer SimulationHumansKineticsMembrane PotentialsMiceMutationPatch-Clamp TechniquesProtein ConformationReceptors, Serotonin, 5-HT3SerotoninSerotonin 5-HT3 Receptor AgonistsTransfectionReceptors, Serotonin, 5-HT3SerotoninSerotonin 5-HT3 Receptor Agonists

Identifiers

PMID19720021
PMCPMC2749742

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.