Evidence map›Paper›PMID 19720018›Full record

ArticleBiophysical journal2009

Effect of energy metabolism on protein motility in the bacterial outer membrane.

Tabita Winther, Lei Xu, Kirstine Berg-Sørensen, Stanley Brown, Lene B Oddershede

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Protection of bacteriophage-sensitiveProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  3. Article
  4. Review
  5. Complex Diffusion in Bacteria.Advances in experimental medicine and biology · 2020
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Nonthermal ATP-dependent fluctuations contribute to the in vivo motion of chromosomal loci.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Tabita WintherThe Niels Bohr Institute, University of Copenhagen, Copenhagen, Denmark.
Lei Xu
Kirstine Berg-Sørensen
Stanley Brown
Lene B Oddershede
University of Copenhagen · DKTechnical University of Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We demonstrate the energy dependence of the motion of a porin, the lambda-receptor, in the outer membrane of living Escherichia coli by single molecule investigations. By poisoning the bacteria with arsenate and azide, the bacterial energy metabolism was stopped. The motility of individual lambda-receptors significantly and rapidly decreased upon energy depletion. We suggest two different causes for the ceased motility upon comprised energy metabolism: One possible cause is that the cell uses energy to actively wiggle its proteins, this energy being one order-of-magnitude larger than thermal energy. Another possible cause is an induced change in the connection between the lambda-receptor and the membrane structure, for instance by a stiffening of part of the membrane structure. Treatment of the cells with ampicillin, which directly targets the bacterial cell wall by inhibiting cross-linking of the peptidoglycan layer, had an effect similar to energy depletion and the motility of the lambda-receptor significantly decreased. Since the lambda-receptor is closely linked to the peptidoglycan layer, we propose that lambda-receptor motility is directly coupled to the constant and dynamic energy-consuming reconstruction of the peptidoglycan layer. The result of this motion could be to facilitate transport of maltose-dextrins through the porin.

Indexed as

Energy MetabolismAlgorithmsAmpicillinAnti-Bacterial AgentsArsenatesAzidesBacterial Outer Membrane ProteinsCell WallEscherichia coliKineticsModels, BiologicalMotionPeptidoglycanPorinsProtein TransportQuantum DotsAmpicillinAnti-Bacterial AgentsArsenatesarsenic acidAzidesBacterial Outer Membrane ProteinsmaltoporinsPeptidoglycanPorinsReceptors, Virus

Identifiers

PMID19720018
PMCPMC2749758
OpenAlexW2029158435

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.