Evidence map›Paper›PMID 19717563›Full record

ArticleThe Journal of biological chemistry2009

A quantification of pathway components supports a novel model of Hedgehog signal transduction.

Shohreh F Farzan, Melanie A Stegman, Stacey K Ogden, Manuel Ascano, Kendall E Black, Ofelia Tacchelly, David J Robbins

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Proteostasis in the Hedgehog signaling pathway.Seminars in cell & developmental biology · 2019
    Review
  2. Article
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shohreh F FarzanDepartment of Pharmacology and Toxicology, Dartmouth Medical School, Hanover, New Hampshire 03755, USA.
Melanie A Stegman
Stacey K Ogden
Manuel Ascano
Kendall E Black
Ofelia Tacchelly
David J Robbins

Funding

RECONSTITUTION OF HEDGEHOG SIGNALING COMPLEXR01CA082628 · NCI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI ROBBINS, DAVID J · 1999 to 2014
$4.1M
NCI NIH HHS CA8628
6 · The paper itself

Abstract

The secreted protein Hedgehog (Hh) plays a critical instructional role during metazoan development. In Drosophila, Hh signaling is interpreted by a set of conserved, downstream effectors that differentially localize and interact to regulate the stability and activity of the transcription factor Cubitus interruptus. Two essential models that integrate genetic, cell biological, and biochemical information have been proposed to explain how these signaling components relate to one another within the cellular context. As the molar ratios of the signaling effectors required in each of these models are quite different, quantitating the cellular ratio of pathway components could distinguish these two models. Here, we address this important question using a set of purified protein standards to perform a quantitative analysis of Drosophila cell lysates for each downstream pathway component. We determine each component's steady-state concentration within a given cell, demonstrate the molar ratio of Hh signaling effectors differs more than two orders of magnitude and that this ratio is conserved in vivo. We find that the G-protein-coupled transmembrane protein Smoothened, an activating component, is present in limiting amounts, while a negative pathway regulator, Suppressor of Fused, is present in vast molar excess. Interestingly, despite large differences in the steady-state ratio, all downstream signaling components exist in an equimolar membrane-associated complex. We use these quantitative results to re-evaluate the current models of Hh signaling and now propose a novel model of signaling that accounts for the stoichiometric differences observed between various Hh pathway components.

Indexed as

AnimalsCytosolDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsGene Expression Regulation, DevelopmentalHedgehog ProteinsInsectaKinesinsModels, BiologicalProtein Serine-Threonine KinasesReceptors, G-Protein-CoupledRecombinant ProteinsRepressor ProteinsSignal TransductionSubcellular Fractionsci protein, Drosophilacos protein, DrosophilaDNA-Binding ProteinsDrosophila Proteinsfu protein, DrosophilaHedgehog ProteinsKinesinsProtein Serine-Threonine KinasesReceptors, G-Protein-CoupledRecombinant ProteinsRepressor ProteinsSu(fu) protein, DrosophilaTranscription Factors

Identifiers

PMID19717563
PMCPMC2781433

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.