Evidence map›Paper›PMID 19716110›Full record

ArticleAmerican journal of human genetics2009

A positive modifier of spinal muscular atrophy in the SMN2 gene.

Thomas W Prior, Adrian R Krainer, Yimin Hua, Kathryn J Swoboda, Pamela C Snyder, Scott J Bridgeman, Arthur H M Burghes, John T Kissel

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in American journal of human genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 182 papers.

0numbers the graph read from it
0cells of the map it votes in
182citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

182 citing papers in PubMed, 310 citations in OpenAlex.

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  15. First combined analysis ofMolecular genetics and metabolism reports · 2026
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  17. Single NucleotideNeurology. Genetics · 2025
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122 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Thomas W PriorDepartment of Pathology, Ohio State University, Columbus, OH 43210, USA. thomas.prior@osumc.edu
Adrian R Krainer
Yimin Hua
Kathryn J Swoboda
Pamela C Snyder
Scott J Bridgeman
Arthur H M Burghes
John T Kissel
The Ohio State University · USCold Spring Harbor Laboratory · USUniversity of Utah · US

Funding

University of Iowa Clinical and Translational Science Program (TL1)UL1RR025755 · NCRR · OHIO STATE UNIVERSITY · PI JACKSON, REBECCA D · 2008 to 2011
$26.3M
UNIVERSITY OF UTAH CENTER FOR CLINICAL AND TRANSLATIONAL SCIENCE-UL1: BPCAUL1RR025764 · NCRR · UNIVERSITY OF UTAH · PI MCCLAIN, DONALD A. · 2008 to 2011
$19.4M
BIOCHEMISTRY OF PREMRNA SPLICINGR01GM042699 · NIGMS · COLD SPRING HARBOR LABORATORY · PI Adrian R Krainer · 1989 to 2026
$8.8M
Therapeutic Opportunities in Spinal Muscular AtrophyR01HD054599 · NICHD · UNIVERSITY OF UTAH · PI SWOBODA, KATHRYN J. · 2007 to 2011
$1.5M
EXTRAMURAL RESEARCH FACILITIES CONSTRUCTIONC06RR011234 · NCRR · UNIVERSITY OF UTAH · PI MATSEN, JOHN M · 1995 to 1995
–
NCRR NIH HHS C06 RR011234NCRR NIH HHS UL1 RR025755NCRR NIH HHS UL1 RR025764NCRR NIH HHS UL1-RR025764NICHD NIH HHS R01 HD054599NICHD NIH HHS R01-HD054599-01NIGMS NIH HHS R01 GM042699NIGMS NIH HHS R01-GM42699
6 · The paper itself

Abstract

Spinal muscular atrophy (SMA) is a common autosomal-recessive motor neuron disease caused by the homozygous loss of the SMN1 gene. A nearly identical gene, SMN2, has been shown to decrease the severity of SMA in a dose-dependent manner. However SMN2 is not the sole phenotypic modifier, because there are discrepant SMA cases in which the SMN2 copy number does not explain the clinical phenotype. This report describes three unrelated SMA patients who possessed SMN2 copy numbers that did not correlate with the observed mild clinical phenotypes. A single base substitution in SMN2, c.859G>C,, was identified in exon 7 in the patients' DNA. We now show that the change creates a new exonic splicing enhancer element and increases the amount of full-length transcripts, thus resulting in the less severe phenotypes. This demonstrates that the c.859G>C substitution is a positive modifier of the SMA phenotype and that not all SMN2 genes are equivalent. We have shown not only that the SMA phenotype is modified by the number of SMN2 genes but that SMN2 sequence variations can also affect the disease severity.

Indexed as

AdultAmino Acid MotifsBase SequenceDNA Mutational AnalysisFemaleHumansMaleMolecular Sequence DataMuscular Atrophy, SpinalSurvival of Motor Neuron 2 ProteinSMN2 protein, humanSurvival of Motor Neuron 2 Protein

Identifiers

PMID19716110
PMCPMC2771537
OpenAlexW1975560789

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.