Evidence map›Paper›PMID 19713521›Full record

ArticleScience (New York, N.Y.)2009

On the origin and spread of an adaptive allele in deer mice.

Catherine R Linnen, Evan P Kingsley, Jeffrey D Jensen, Hopi E Hoekstra

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed, 1 pooled it
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 1 synthesis or guideline pooled it, 253 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Evolution of Litter Size: Proximate and Ultimate Mechanisms.Integrative and comparative biology · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Genetics of adaptation.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  18. An enhancer ofProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Article
  20. Article

49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Catherine R LinnenDepartment of Organismic and Evolutionary Biology and the Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, MA 02138, USA. clinnen@oeb.harvard.edu
Evan P Kingsley
Jeffrey D Jensen
Hopi E Hoekstra
Harvard University · US

Funding

Molecular mechanisms underlying parallel Agouti adaptation in PeromyscusF32GM083073 · NIGMS · HARVARD UNIVERSITY · PI LINNEN, CATHERINE RAMSAY · 2007 to 2009
$142k
NIGMS NIH HHS F32 GM083073
6 · The paper itself

Abstract

Adaptation is a central focus of biology, although it can be difficult to identify both the strength and agent of selection and the underlying molecular mechanisms causing change. We studied cryptically colored deer mice living on the Nebraska Sand Hills and show that their light coloration stems from a novel banding pattern on individual hairs produced by an increase in Agouti expression caused by a cis-acting mutation (or mutations), which either is or is closely linked to a single amino acid deletion in Agouti that appears to be under selection. Furthermore, our data suggest that this derived Agouti allele arose de novo after the formation of the Sand Hills. These findings reveal one means by which genetic, developmental, and evolutionary mechanisms can drive rapid adaptation under ecological pressure.

Indexed as

AllelesEvolution, MolecularAdaptation, PhysiologicalAgouti Signaling ProteinAnimalsCrosses, GeneticEcosystemGene FrequencyHairHair ColorHaplotypesLinkage DisequilibriumMelaninsMolecular Sequence DataMutationNebraskaAgouti Signaling Proteina protein, mouseeumelaninMelaninspheomelaninRNA, MessengerSerine

Identifiers

PMID19713521
PMCPMC2736094
OpenAlexW2031215445

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.