Evidence map›Paper›PMID 19710472›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2009

XBP-1-deficient plasmablasts show normal protein folding but altered glycosylation and lipid synthesis.

Annette M McGehee, Stephanie K Dougan, Elizabeth J Klemm, Guanghou Shui, Boyoun Park, You-Me Kim, Nicki Watson, Markus R Wenk, Hidde L Ploegh, Chih-Chi Andrew Hu

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Sec22b is a critical and nonredundant regulator of plasma cell maintenance.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Epigenetic gene regulation in plasma cells.Immunological reviews · 2021
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Plasma cells: You are what you eat.Immunological reviews · 2019
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Evaluating Acetate Metabolism for Imaging and Targeting in Multiple Myeloma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2017
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Annette M McGeheeWhitehead Institute for Biomedical Research, Cambridge, MA 02142, USA.
Stephanie K Dougan
Elizabeth J Klemm
Guanghou Shui
Boyoun Park
You-Me Kim
Nicki Watson
Markus R Wenk
Hidde L Ploegh
Chih-Chi Andrew Hu
Whitehead Institute for Biomedical Research · USNational University of Singapore · SG

Funding

ASSEMBLY OF MHC CLASS I MOLECULES IN VITRO AND IN VIVOR01AI033456 · NIAID · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI PLOEGH, HIDDE L. · 1993 to 2012
$4.0M
NIAID NIH HHS R01 AI033456
6 · The paper itself

Abstract

The accumulation of misfolded secreted IgM in the endoplasmic reticulum (ER) of X-box binding protein 1 (XBP-1)-deficient B cells has been held responsible for the inability of such cells to yield plasma cells, through the failure to mount a proper unfolded protein response. LPS-stimulated B cells incapable of secreting IgM still activate the XBP-1 axis normally, as follows: XBP-1 is turned on by cues that trigger differentiation and not in response to accumulation of unfolded IgM, but the impact of XBP-1 deficiency on glycoprotein folding and assembly has not been explored. The lack of XBP-1 compromised neither the formation of functional hen egg lysozyme-specific IgM nor the secretion of free kappa-chains. Although XBP-1 deficiency affects the synthesis of some ER chaperones, including protein disulfide isomerase, their steady state levels do not drop below the threshold required for proper assembly and maturation of the Igalpha/Igbeta heterodimer and MHC molecules. Intracellular transport and surface display of integral membrane proteins are unaffected by XBP-1 deficiency. Given the fact that we failed to observe any defects in folding of a variety of glycoproteins, we looked for other means to explain the requirement for XBP-1 in plasma cell development. We observed significantly reduced levels of phosphatidylcholine, sphingomyelin, and phosphatidylinositol in total membranes of XBP-1-deficient B cells, and reduced ER content. Terminal N-linked glycosylation of IgM and class I MHC was altered in these cells. XBP-1 hence has important roles beyond folding proteins in the ER.

Indexed as

Protein FoldingAnimalsB-LymphocytesDNA-Binding ProteinsEndoplasmic ReticulumGlycosylationHistocompatibility Antigens Class IImmunoglobulin MLipidsMembrane LipidsMiceMice, Mutant StrainsPlasma CellsRegulatory Factor X Transcription FactorsTranscription FactorsX-Box Binding Protein 1DNA-Binding ProteinsHistocompatibility Antigens Class IImmunoglobulin MLipidsMembrane LipidsRegulatory Factor X Transcription FactorsTranscription FactorsX-Box Binding Protein 1Xbp1 protein, mouse

Identifiers

PMID19710472
PMCPMC4053221
OpenAlexW1648073061

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.