ArticleBMC genomics2009
Comparative 454 pyrosequencing of transcripts from two olive genotypes during fruit development.
Article in BMC genomics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 117 papers, 1 of them a synthesis that pooled it.
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Who cites it
117 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Meta-analysis of transcriptome reveals key genes relating to oil quality in olive.BMC genomics · 2023Pooled it
- Transcriptome Analysis Reveals Metabolic Pathways and Key Genes Involved in Oleic Acid Formation of Sunflower (International journal of molecular sciences · 2025Article
- Transcriptomic Analysis During Olive Fruit Development and Expression Profiling of Fatty Acid Desaturase Genes.International journal of molecular sciences · 2024Article
- Article
- Hormonal Content and Gene Expression during Olive Fruit Growth and Ripening.Plants (Basel, Switzerland) · 2023Article
- Combined Transcriptomic and Metabolomic Approach Revealed a Relationship between Light Control, Photoprotective Pigments, and Lipid Biosynthesis in Olives.International journal of molecular sciences · 2023Article
- The Chemical Composition and Transcriptome Analysis Reveal the Mechanism of Color Formation in Tea (International journal of molecular sciences · 2023Article
- OeBAS and CYP716C67 catalyze the biosynthesis of health-beneficial triterpenoids in olive (Olea europaea) fruits.The New phytologist · 2023Article
- Modulation of Anthocyanin Biosynthesis-Related Genes during the Ripening ofInternational journal of molecular sciences · 2023Article
- Characterization of Transcriptome Dynamics during Early Fruit Development in Olive (International journal of molecular sciences · 2023Article
- Microsatellite Markers in Olives (Foods (Basel, Switzerland) · 2021Review
- Olive Fruit Development and Ripening: Break on through to the "-Omics" Side.International journal of molecular sciences · 2021Review
- Article
- High oil accumulation in tuber of yellow nutsedge compared to purple nutsedge is associated with more abundant expression of genes involved in fatty acid synthesis and triacylglycerol storage.Biotechnology for biofuels · 2021Article
- Genetic Structure and Core Collection of Olive Germplasm from Albania Revealed by Microsatellite Markers.Genes · 2021Article
- Comparative Transcriptomic and Metabolic Analyses Reveal the Molecular Mechanism of Ovule Development in the Orchid,Frontiers in plant science · 2021Article
- Transcriptome and Hormone Analyses Revealed Insights into Hormonal and Vesicle Trafficking Regulation amongInternational journal of molecular sciences · 2020Article
- Somatic Embryogenesis from Mature Embryos ofPlants (Basel, Switzerland) · 2020Article
- Characterization and validation of olive FAD and SAD gene families: expression analysis in different tissues and during fruit development.Molecular biology reports · 2020Article
- Bioinformatics Resources for Plant Abiotic Stress Responses: State of the Art and Opportunities in the Fast Evolving -Omics Era.Plants (Basel, Switzerland) · 2020Review
57 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
10 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundDespite its primary economic importance, genomic information on olive tree is still lacking. 454 pyrosequencing was used to enrich the very few sequence data currently available for the Olea europaea species and to identify genes involved in expression of fruit quality traits.
resultsFruits of Coratina, a widely cultivated variety characterized by a very high phenolic content, and Tendellone, an oleuropein-lacking natural variant, were used as starting material for monitoring the transcriptome. Four different cDNA libraries were sequenced, respectively at the beginning and at the end of drupe development. A total of 261,485 reads were obtained, for an output of about 58 Mb. Raw sequence data were processed using a four step pipeline procedure and data were stored in a relational database with a web interface.
conclusionMassively parallel sequencing of different fruit cDNA collections has provided large scale information about the structure and putative function of gene transcripts accumulated during fruit development. Comparative transcript profiling allowed the identification of differentially expressed genes with potential relevance in regulating the fruit metabolism and phenolic content during ripening.
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