Evidence map›Paper›PMID 19709057›Full record

ReviewCellular microbiology2009

'Nothing is permanent but change'- antigenic variation in persistent bacterial pathogens.

Guy H Palmer, Troy Bankhead, Sheila A Lukehart

Open access · bronzeAbstract readReview
In one paragraph

Review in Cellular microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 91 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Subversion of the immune response of human pathogenic spirochetes.Journal of clinical laboratory analysis · 2022
    Review
  5. Review
  6. Laboratory Diagnosis of Lyme Borreliosis.Clinical microbiology reviews · 2021
    Review
  7. Epidemiological and Clinicopathological Features ofFrontiers in veterinary science · 2021
    Review
  8. Article
  9. ResumptiveFrontiers in microbiology · 2019
    Article
  10. Article
  11. Article
  12. Review
  13. Frontiers in immunology · 2017
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Antigenic Variation in Bacterial Pathogens.Microbiology spectrum · 2016
    Article
  20. Role of the VlsE Lipoprotein in Immune Avoidance by the Lyme Disease SpirocheteForum on immunopathological diseases and therapeutics · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Guy H PalmerDepartment of Microbiology and Pathology, Washington State University, Pullman, WA 99164-7040, USA. gpalmer@vetmed.wsu.edu
Troy Bankhead
Sheila A Lukehart
Washington State University · US

Funding

TREPONEMA PALLIDUM PATHOGENESIS ASSOCIATED MOLECULESR01AI042143 · NIAID · UNIVERSITY OF WASHINGTON · PI LUKEHART, SHEILA A. · 1998 to 2015
$5.4M
Antigenic variation in microbial transmissionR37AI044005 · NIAID · WASHINGTON STATE UNIVERSITY · PI PALMER, GUY HUGHES · 2009 to 2018
$3.3M
NIAID NIH HHS R01 AI042143NIAID NIH HHS R37 AI044005
6 · The paper itself

Abstract

Pathogens persist in immunocompetent mammalian hosts using various strategies, including evasion of immune effectors by antigenic variation. Among highly antigenically variant bacteria, gene conversion is used to generate novel expressed variants from otherwise silent donor sequences. Recombination using oligonucleotide segments from multiple donors is a combinatorial mechanism that tremendously expands the variant repertoire, allowing thousands of variants to be generated from a relatively small donor pool. Three bacterial pathogens, each encoded by a small genome (< 1.2 Mb), illustrate this variant generating capacity and its role in persistent infection. Borrelia burgdorferi VlsE diversity is encoded and expressed on a linear plasmid required for persistence and recent experiments have demonstrated that VlsE recombination is necessary for persistence in the immunocompetent host. In contrast, both Treponema pallidum TprK and Anaplasma marginale Msp2 expression sites and donors are chromosomally encoded. Both T. pallidum and A. marginale generate antigenic variants in vivo in individual hosts and studies at the population level reveal marked strain diversity in the variant repertoire that may underlie pathogen strain structure and the capacity for re-infection and heterologous strain superinfection. Here, we review gene conversion in bacterial antigenic variation and discuss the short- and long-term selective pressures that shape the variant repertoire.

Indexed as

Antigenic VariationAnimalsAntigens, BacterialGene ConversionGram-Negative BacteriaGram-Negative Bacterial InfectionsHumansVirulenceAntigens, Bacterial

Identifiers

PMID19709057
PMCPMC3354987
OpenAlexW2106706252

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.