Evidence map›Paper›PMID 19707515›Full record

ArticlePloS one2009

Expression and functional studies of ubiquitin C-terminal hydrolase L1 regulated genes.

Anjali Bheda, Julia Shackelford, Joseph S Pagano

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  8. BioMed research international · 2018
    Article
  9. Article
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  11. Prognostic potential and oncogenic effects of UCH-L1 expression in hilar cholangiocarcinoma.International journal of clinical and experimental pathology · 2017
    Article
  12. Article
  13. The de-ubiquitinase UCHL1 promotes gastric cancer metastasis via the Akt and Erk1/2 pathways.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2015
    Article
  14. Article
  15. Article
  16. Article
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  18. Article
  19. BAP1 and cancer.Nature reviews. Cancer · 2013
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Anjali BhedaLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, North Carolina, USA.
Julia Shackelford
Joseph S Pagano
University of North Carolina at Chapel Hill · USUNC Lineberger Comprehensive Cancer Center

Funding

Vironomics and Biostatistics CoreP01CA019014 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Dirk P Dittmer · 1985 to 2026
$43.8M
A FUNCTIONAL STUDY OF UBIQUITIN C-TERMINAL HYDROLASE L1 EXPRESSION IN B-LYMPHOMAR03AI085545 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SHACKELFORD, JULIA · 2010 to 2011
$147k
NCI NIH HHS 2-P01-CA19014-26NCI NIH HHS P01 CA019014NIAID NIH HHS R03 AI085545
6 · The paper itself

Abstract

Deubiquitinating enzymes (DUBs) have been increasingly implicated in regulation of cellular processes, but a functional role for Ubiquitin C-terminal Hydrolases (UCHs), which has been largely relegated to processing of small ubiquitinated peptides, remains unexplored. One member of the UCH family, UCH L1, is expressed in a number of malignancies suggesting that this DUB might be involved in oncogenic processes, and increased expression and activity of UCH L1 have been detected in EBV-immortalized cell lines. Here we present an analysis of genes regulated by UCH L1 shown by microarray profiles obtained from cells in which expression of the gene was inhibited by RNAi. Microarray data were verified with subsequent real-time PCR analysis. We found that inhibition of UCH L1 activates genes that control apoptosis, cell cycle arrest and at the same time suppresses expression of genes involved in proliferation and migration pathways. These findings are complemented by biological assays for apoptosis, cell cycle progression and migration that support the data obtained from microarray analysis, and suggest that the multi-functional molecule UCH L1 plays a role in regulating principal pathways involved in oncogenesis.

Indexed as

Gene Expression RegulationApoptosisBase SequenceCell CycleCell LineCell MovementCell ProliferationDNA PrimersHumansOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionUbiquitin ThiolesteraseDNA PrimersUbiquitin Thiolesterase

Identifiers

PMID19707515
PMCPMC2729380
OpenAlexW2044616456

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.